Pairwise Alignments

Query, 355 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 365 a.a., HTH-type transcriptional regulator DegA from Xanthobacter sp. DMC5

 Score =  119 bits (297), Expect = 2e-31
 Identities = 98/342 (28%), Positives = 153/342 (44%), Gaps = 16/342 (4%)

Query: 6   SPRARPGIKALAEATGYSIATVSKALNGSPMVAPATKALIHRAAADIGYRANARGMALRT 65
           +P  +  ++ LA   G S AT+S AL  SPMVA AT+  +  AA   GY AN    ALRT
Sbjct: 21  APIGKVTLQGLARELGLSTATISLALRDSPMVAEATRLKVQEAARARGYVANRGAAALRT 80

Query: 66  GRTCQAAVLMPVTAARDYEWDGVEYTQILSGISQALEGSDYRMSVHVVRNVEDGCEVARR 125
            RT        + A   ++     +T++L+ +  AL  S+   +V +  + ED     R 
Sbjct: 81  ART-------NIVALGLHDIVNPSFTELLAAVEDAL--SEAGKTVLLGVSQEDVARQTRT 131

Query: 126 I--IDEGLADGLIFSGIRADDPRIDLLDESRFPFVSLGRCRKPLDYAHVDI---DNEWAA 180
           +  + E   D  + S   A   R++ L       +++ +  + ++ +  D    D+    
Sbjct: 132 LGTLAEYRPDAFLVSP--AAHSRVEDLKALASTGIAVVQVTREIEGSGFDFAGSDDVTGV 189

Query: 181 HAATARLIAGGHRRIALVNPLRHLSYAEDRVDGFLRAFREANLSPSDDLIAEGDLSTHFG 240
               A L+A GHRRI ++     +S    R  G+      A +     L+ EG      G
Sbjct: 190 ALGVAHLVALGHRRIGMIGGFGAISTGRKRFAGYKAGLAAAGIPLDPTLVMEGPGLRAEG 249

Query: 241 RESALGLLDAARPPTAFVCSNESTTLGVLSGLGSRGRRIGVDVDVVAYDDINVSAYFTPP 300
           R++   LL    PPTA VC N+ +  G L  L + G   G D  +V YDDI  +  + PP
Sbjct: 250 RKAMARLLALDEPPTAAVCFNDLSAFGALMELQAAGLTAGRDFSLVGYDDIEEARVWHPP 309

Query: 301 ITTFYQPIEVLGRTLGEFLLRRMAGEDARSLKQVFRPRLIER 342
           +TT +  I   GR      L+R+A       + V  P+L+ R
Sbjct: 310 LTTVHTFIPEYGRAAATLALKRIADPGRPVERAVMTPQLVVR 351