Pairwise Alignments

Query, 355 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  115 bits (288), Expect = 2e-30
 Identities = 92/338 (27%), Positives = 154/338 (45%), Gaps = 23/338 (6%)

Query: 13  IKALAEATGYSIATVSKALNGSPMVAPATKALIHRAAADIGYRANARGMALRTGRTCQAA 72
           IK +A     S+ TVS  +N +  V+   +  +  A  ++GY  NA   +L++  T    
Sbjct: 4   IKDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTSTLG 63

Query: 73  VLMPVTAARDYEWDGVEYTQILSGISQALEGSDYRMSVHVVRNVEDGCEVARRIIDEGLA 132
           +L+P  ++  Y      + +I+  +     G+ Y + +    +      V  +++ E   
Sbjct: 64  MLIP-NSSNPY------FAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRI 116

Query: 133 DGLI--FSGIRADDPRIDLLDESRFPFVSLGRCRKPLDYAHVDIDNEWAAHA-----ATA 185
           DGLI   +G   DD  +  L   R P V + R     + A    D    AH      A  
Sbjct: 117 DGLIVVLTGTGDDDALVKQLHGLRVPTVLVDR-----EIADPACDLVETAHMQGGLLAVR 171

Query: 186 RLIAGGHRRIALVNPLRHLSYAEDRVDGFLRAFREANLSPS----DDLIAEGDLSTHFGR 241
            L++ GH+RIA +     +  +E R++G+  A  EA  +P     D L+  G  ++  G 
Sbjct: 172 HLLSLGHKRIACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTSQGGY 231

Query: 242 ESALGLLDAARPPTAFVCSNESTTLGVLSGLGSRGRRIGVDVDVVAYDDINVSAYFTPPI 301
           E+   +L   R P+A    N+   +G L      G R+  D+ +V +DDI +SAY +PP+
Sbjct: 232 EAMHAILRTERKPSAVFVCNDLMAIGALRAAHESGVRVPDDLSIVGFDDIELSAYTSPPL 291

Query: 302 TTFYQPIEVLGRTLGEFLLRRMAGEDARSLKQVFRPRL 339
           TT  QP E +G    + LL +M G+   + K V +P L
Sbjct: 292 TTVAQPKERIGAMAVDMLLEQMGGKRRDARKVVLQPEL 329