Pairwise Alignments

Query, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 1098 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score = 82.8 bits (203), Expect = 1e-19
 Identities = 52/148 (35%), Positives = 80/148 (54%), Gaps = 12/148 (8%)

Query: 568 VAAAVDITGRKQAEEALQESERRLQLALDAGHMGAWEWNLETGEVIWSPGLEALHRIEPG 627
           ++  +D T RK AE+AL++S+ RL LALD+  +G W+W++ TG +  S     LH + P 
Sbjct: 262 ISTFLDTTERKNAEQALKDSQERLDLALDSAQLGTWDWHIPTGMLYGSARAAQLHGLPPE 321

Query: 628 SFGGTLADFKRDIHPDDLPLIERE-MARAIET-----DGDYHVVYRAQLPDGTIRWMEAF 681
            F  +   F   + PDD    ERE M  A  T      G+Y + YR  + DG+ R++E+ 
Sbjct: 322 PFHESFDAFFEGM-PDD----ERESMRNAYRTLREGPAGNYQLTYRVPMEDGSSRYLESR 376

Query: 682 GQL-SPRNGPKRRLTGVCMDITERREAE 708
            +L     G   R+ G  +DIT++ E E
Sbjct: 377 ARLYRDEQGAPLRMAGTLLDITDQVERE 404



 Score = 73.9 bits (180), Expect = 5e-17
 Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 1/131 (0%)

Query: 579 QAEEALQESERRLQLALDAGHMGAWEWNLETGEVIWSPGLEALHRIEPGSFGGTLADFKR 638
           QA E   +S  +L  AL+A  +GAW W +++G + WS G +AL   +P        D+  
Sbjct: 20  QAAEQSWDSAPQLLAALNAARLGAWCWEIDSGRISWSRGTQALFGFDPRQPLPNDLDYLD 79

Query: 639 DIHPDDLPLIEREMARAIETDG-DYHVVYRAQLPDGTIRWMEAFGQLSPRNGPKRRLTGV 697
            + P+D   + R     +  +  +  + +  Q PDG++ W+E  G L+P    +RR+ GV
Sbjct: 80  LLAPEDSARVVRAFHAVLAGEPFEQAMHHHIQWPDGSLHWLEINGSLAPDKAGRRRMIGV 139

Query: 698 CMDITERREAE 708
             +IT +R+ E
Sbjct: 140 IREITHQRDRE 150



 Score = 34.7 bits (78), Expect = 3e-05
 Identities = 35/153 (22%), Positives = 67/153 (43%), Gaps = 8/153 (5%)

Query: 135 MDLSGAKDMERSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESIT 194
           +D   A+    S+  L A + ++        +D    SW+RG Q LFG+   + +   + 
Sbjct: 17  LDPQAAEQSWDSAPQLLAALNAARLGAWCWEIDSGRISWSRGTQALFGFDPRQPLPNDLD 76

Query: 195 I--LIPPERLSEEPGILERIRRGELVDH-FETKRRRKDGTL--VDISLTVSPVRDATGRI 249
              L+ PE  +        +  GE  +       +  DG+L  ++I+ +++P +    R+
Sbjct: 77  YLDLLAPEDSARVVRAFHAVLAGEPFEQAMHHHIQWPDGSLHWLEINGSLAPDKAGRRRM 136

Query: 250 IGASKIARDITETKSAAEALAARFREQAALYRL 282
           IG   + R+IT  +    AL+   +  A L+ L
Sbjct: 137 IG---VIREITHQRDRENALSHSEKRFATLFHL 166



 Score = 34.3 bits (77), Expect = 4e-05
 Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 1/101 (0%)

Query: 143 MERSSRYLAAIVESSDDAIVAKNLD-GIITSWNRGAQRLFGYAAEEVIGESITILIPPER 201
           ++ S    A    SS DAI     D G     N G  RL GY AEE IG ++  +     
Sbjct: 532 LKASEEKFAKAFHSSPDAISITERDTGRYVEVNDGFCRLTGYRAEEAIGLTLYQIGIWAD 591

Query: 202 LSEEPGILERIRRGELVDHFETKRRRKDGTLVDISLTVSPV 242
            ++   +L  ++    +++ E     K G L+ + ++V P+
Sbjct: 592 ENQRAALLAELQIKGRINYLEMLWHNKRGELLAVEVSVEPI 632



 Score = 33.9 bits (76), Expect = 6e-05
 Identities = 27/95 (28%), Positives = 39/95 (41%), Gaps = 4/95 (4%)

Query: 500 PPGEHPTNFRVFSEGRALSPEELP--VQRAARGEEVQNFEEEVR--FDDGSSRHIFGNAT 555
           PP     +F  F EG      E      R  R     N++   R   +DGSSR++   A 
Sbjct: 319 PPEPFHESFDAFFEGMPDDERESMRNAYRTLREGPAGNYQLTYRVPMEDGSSRYLESRAR 378

Query: 556 PLRDVTGEVVGAVAAAVDITGRKQAEEALQESERR 590
             RD  G  +      +DIT + + E+ L  SE +
Sbjct: 379 LYRDEQGAPLRMAGTLLDITDQVEREQRLTASEEK 413



 Score = 28.9 bits (63), Expect = 0.002
 Identities = 40/171 (23%), Positives = 75/171 (43%), Gaps = 12/171 (7%)

Query: 106 PDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAKDMERS-----SRYLAAIVESSDDA 160
           PDG S+  L     +  D       + V+ +++  +D E +      R+        +  
Sbjct: 113 PDG-SLHWLEINGSLAPDKAGRRRMIGVIREITHQRDRENALSHSEKRFATLFHLCPNMV 171

Query: 161 IVAKNLDGIITSWNRGAQRLFGYAAEEVIGESITILIPPERLSEEPGILERI--RRGELV 218
           ++ +  DG+I+  N+  + LFG+   + IG + T+ +   R  E+   L +   R+GE +
Sbjct: 172 LLTRQADGLISEANQYFEMLFGWPLADAIGRT-TLDLGLWRHPEQRAQLVKATQRKGEPI 230

Query: 219 DHFETKRRRKDGTLVDISLTVSPVRDATGRIIGASKIARDITETKSAAEAL 269
              E +    +G + D +L+   V +  G     S    D TE K+A +AL
Sbjct: 231 T-MEVQFCASNGQIHDGTLSAQKV-ELEGEAYLISTFL-DTTERKNAEQAL 278