Pairwise Alignments
Query, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 853 a.a., Sensor histidine kinase from Sinorhizobium meliloti 1021
Score = 313 bits (801), Expect = 4e-89
Identities = 155/270 (57%), Positives = 200/270 (74%), Gaps = 5/270 (1%)
Query: 2 HGAEILPKTT----IDDVTTSDTPDYRAVLDALAVPVYATDAEGIVTYCNAAAAAVAGRE 57
+G +L T +DD R +L+AL VY TDAEG +T+ N AA +AGR
Sbjct: 391 YGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRT 450
Query: 58 PELGKDRWCVSWQLRRPDGSPLPHDECPMARTLKEGQPVRGEEVVAVRPDGASVPLLPHP 117
P++G D+WCV+W+L RPDG+ LPHD+CPMA TLKE +PVRGE+ VA RPDG VP +P+P
Sbjct: 451 PQIG-DKWCVTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVAERPDGTRVPFIPYP 509
Query: 118 TPIFDDTGALTGAVNVLMDLSGAKDMERSSRYLAAIVESSDDAIVAKNLDGIITSWNRGA 177
TP+ D G L GAVN+L+D+S + + LA+IV SDDAIV+K+ GII +WN+GA
Sbjct: 510 TPLHDVAGKLVGAVNMLVDISDREKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGA 569
Query: 178 QRLFGYAAEEVIGESITILIPPERLSEEPGILERIRRGELVDHFETKRRRKDGTLVDISL 237
+RLFGY+AEEVIG+ I ILIPP+R EEPGILERIRR E +DH+ET R RKDG+L+D+SL
Sbjct: 570 ERLFGYSAEEVIGKPINILIPPDRQGEEPGILERIRRDEHIDHYETVRIRKDGSLIDVSL 629
Query: 238 TVSPVRDATGRIIGASKIARDITETKSAAE 267
TVSP++DA GR++GASKIARDITE + + E
Sbjct: 630 TVSPLKDARGRVVGASKIARDITERRRSEE 659
Score = 192 bits (489), Expect = 6e-53
Identities = 153/482 (31%), Positives = 224/482 (46%), Gaps = 52/482 (10%)
Query: 440 QLRRNEANERARAAELAAIMEAVPALIWIARTPDCRVISGNNSSYEIL-RLPHDSNLSMS 498
+ +R + R + ++EA+PA ++ + R+ N ++ E+ R P +
Sbjct: 401 EAKRMDDRRRESEQHMRDLLEALPAAVYTTDA-EGRITFFNKAAVEMAGRTPQIGD---- 455
Query: 499 APPGEHPTNFRVFS-EGRALSPEELPVQRAARGEEVQNFEEEV-RFDDGSSRHIFGNATP 556
+ +R++ +G L ++ P+ + + E+ V DG+ TP
Sbjct: 456 ----KWCVTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVAERPDGTRVPFIPYPTP 511
Query: 557 LRDVTGEVVGAVAAAVDITGRKQAEEALQESERRLQLALDA-------GHMGAWEWNLE- 608
L DV G++VGAV VDI+ R++A E + ++ + DA G + W E
Sbjct: 512 LHDVAGKLVGAVNMLVDISDREKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAER 571
Query: 609 -----TGEVIWSPGLEALHRIEPGSFGGTLADFKRDIHPDDLPLIEREMARAIETDGDYH 663
EVI P + G G L +RD H D + I DG
Sbjct: 572 LFGYSAEEVIGKPINILIPPDRQGEEPGILERIRRDEHIDHYETVR------IRKDGSL- 624
Query: 664 VVYRAQLPDGTIRWMEAFGQLSPRNGPKRRLTG---VCMDITERREAEAQRNLLVAELSH 720
++ +SP + R+ G + DITERR +E R LLV EL+H
Sbjct: 625 --------------IDVSLTVSPLKDARGRVVGASKIARDITERRRSEEHRKLLVNELNH 670
Query: 721 RVKNTLAIVGSIARQTFSTNPDAKAAHRSFDARIRALAQTHTRLAEASWSGVSLKTVLFD 780
RVKNTLA V S+A QTF +A F +R+ ALA+ H L SW G L VL
Sbjct: 671 RVKNTLATVQSLAAQTFR-GVNASEDFGRFQSRLVALARAHDVLTRESWQGADLGEVLHA 729
Query: 781 ELSPYHDDSRTNVTLAGPPAMLPPKHALTLGMAAHELATNAAKHGALSVRSGKVDIEWMI 840
++P + + V +GPP L PK AL L MA HEL TNAAK+GAL+ G + + W +
Sbjct: 730 TINPICVEPQQRVQASGPPLRLRPKMALALSMAFHELCTNAAKYGALTNDGGLIKVNWHV 789
Query: 841 D--VASERLRICWSETGGPAVVAPKHNGFGRLLLERVLASDLGGEVHLEFAPQGLVCTID 898
+ L + W E GGP+V+ P GFG LLER LA +LGG+V L FAP G+ I+
Sbjct: 790 SNIESVSHLHLQWEEIGGPSVMVPARTGFGTRLLERALARELGGKVDLVFAPSGVRFHIE 849
Query: 899 VP 900
P
Sbjct: 850 AP 851
Score = 126 bits (317), Expect = 5e-33
Identities = 94/274 (34%), Positives = 138/274 (50%), Gaps = 24/274 (8%)
Query: 27 LDALAVPVYATDAEGIVTYCNAAAAAVAGREPELG--KDRWCVSWQLRRPDGSPLPHDEC 84
LDA+ VY D EG + NA AA + GR+P L ++R+C S +L DGSP+ H EC
Sbjct: 37 LDAIPGAVYVCDHEGWLVGYNAEAAELWGRQPSLSAPRERFCGSQRLFLSDGSPMDHQEC 96
Query: 85 PMARTLKEGQPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAKDME 144
PMA +K G R EV+ RPDG+ + L + P+ D G + GA+N D+S K +E
Sbjct: 97 PMAEAIKTGVSTRNAEVIIERPDGSRIFALVNIRPLRDHRGVIQGAINCFQDISQQKRIE 156
Query: 145 R----SSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESITILIPPE 200
S+ L E+S + + GII N+ L GY A+E +G I E
Sbjct: 157 AEVNCKSKDLEDFFENSAIGLHIVSAAGIILRANKAELELLGYPADEYVGRHIA-----E 211
Query: 201 RLSEEP---GILERIRRGELVDHFETKRRRKDGTLVDISLTVSPVRDATGRIIGASKIAR 257
++ P IL+R+ GE +D + + R +DG++ + +T S R G+ +
Sbjct: 212 FHADAPVIGDILDRLSCGEKLDRYPARLRARDGSIKHVLIT-SNSRFEDGKFVNTRCFTT 270
Query: 258 DIT---ETKSA----AEALAARFREQAALYRLTE 284
DIT ET++A E LAA + QAA + E
Sbjct: 271 DITSLHETENAWRETEERLAATY--QAATIGIAE 302
Score = 59.7 bits (143), Expect = 8e-13
Identities = 69/304 (22%), Positives = 129/304 (42%), Gaps = 35/304 (11%)
Query: 25 AVLDALAVPVYATDAEGIVTYCNAAAAAVAGREPELGKDRWCVSWQLRRPDGSPLPHDEC 84
A A + + +DA+G + N A + GR E QL H++
Sbjct: 291 ATYQAATIGIAESDADGRLLRVNDAFCTMLGRSRE----------QLLNMTFLDYTHEDD 340
Query: 85 PMARTLKEGQPVRGEEVV------AVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLS 138
+ V GE AV+ DG + L + + + D TG V VL+D++
Sbjct: 341 RDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVT 400
Query: 139 GAKDME----RSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESIT 194
AK M+ S +++ ++E+ A+ + +G IT +N+ A + G + IG+
Sbjct: 401 EAKRMDDRRRESEQHMRDLLEALPAAVYTTDAEGRITFFNKAAVEMAGRTPQ--IGDKWC 458
Query: 195 I---LIPPERL---SEEPGILERIRRGELVDHFETKRRRKDGTLVDISLTVSPVRDATGR 248
+ L P+ ++ + ++ V + R DGT V +P+ D G+
Sbjct: 459 VTWRLYRPDGTYLPHDQCPMAVTLKEDRPVRGEQAVAERPDGTRVPFIPYPTPLHDVAGK 518
Query: 249 IIGASKIARDITETKSAAE-----ALAARFREQAALYRLTERVQRT--KRIEEVYEATLD 301
++GA + DI++ + AAE A RF + A + + T+ + +T K E ++ + +
Sbjct: 519 LVGAVNMLVDISDREKAAEYAERLASIVRFSDDAIVSKDTQGIIQTWNKGAERLFGYSAE 578
Query: 302 AIQG 305
+ G
Sbjct: 579 EVIG 582
Score = 51.2 bits (121), Expect = 3e-10
Identities = 73/302 (24%), Positives = 115/302 (38%), Gaps = 38/302 (12%)
Query: 440 QLRRNEANERARAAELAAIMEAVPALIWIARTPDCRVISGNNSSYEILRLPHDSNLSMSA 499
Q +R EA ++ +L E + I ++ N + E+L P D +
Sbjct: 151 QQKRIEAEVNCKSKDLEDFFENSAIGLHIVSAAGI-ILRANKAELELLGYPADEYV---- 205
Query: 500 PPGEHPTNFRVFSEGRALSPEELPV-----QRAARGEEVQNFEEEVRFDDGSSRHIFGNA 554
G H F + PV R + GE++ + +R DGS +H+ +
Sbjct: 206 --GRHIAEFHA----------DAPVIGDILDRLSCGEKLDRYPARLRARDGSIKHVLITS 253
Query: 555 TPLRDVTGEVVGAVAAAVDITGRKQAEEALQESERRLQLALDAGHMGAWEWNLETGEV-- 612
R G+ V DIT + E A +E+E RL A +G E + + G +
Sbjct: 254 NS-RFEDGKFVNTRCFTTDITSLHETENAWRETEERLAATYQAATIGIAESDAD-GRLLR 311
Query: 613 IWSPGLEALHRIEPGSFGGTLADFKRDIHPDDLPLIEREMARAIETDGD-YHVVYRAQLP 671
+ L R T D+ H DD R AR + + D Y + RA
Sbjct: 312 VNDAFCTMLGRSREQLLNMTFLDY---THEDDRDEEARCYARQVSGETDTYAIRKRAVKA 368
Query: 672 DGTIRWMEAFGQ-LSPRNGPKRRLTGVCMDITE-------RREAEAQRNLLVAELSHRVK 723
DGT+ +++ + + R G R V +D+TE RRE+E L+ L V
Sbjct: 369 DGTVIYLDVYSSTVRDRTGRFRYGVRVLLDVTEAKRMDDRRRESEQHMRDLLEALPAAVY 428
Query: 724 NT 725
T
Sbjct: 429 TT 430
Score = 41.2 bits (95), Expect = 3e-07
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Query: 496 SMSAPPGEHPTNFRVF-SEGRALSPEELPVQRAAR-GEEVQNFEEEVRFDDGSSRHIFGN 553
S+SAP + R+F S+G + +E P+ A + G +N E + DGS N
Sbjct: 69 SLSAPRERFCGSQRLFLSDGSPMDHQECPMAEAIKTGVSTRNAEVIIERPDGSRIFALVN 128
Query: 554 ATPLRDVTGEVVGAVAAAVDITGRKQAEEALQESERRLQ 592
PLRD G + GA+ DI+ +K+ E + + L+
Sbjct: 129 IRPLRDHRGVIQGAINCFQDISQQKRIEAEVNCKSKDLE 167
Score = 40.4 bits (93), Expect = 5e-07
Identities = 36/144 (25%), Positives = 60/144 (41%), Gaps = 3/144 (2%)
Query: 121 FDDTGALTGAVNVLMDLSGAKDMERSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRL 180
F +T T + L + A + LAA +++ I + DG + N +
Sbjct: 262 FVNTRCFTTDITSLHETENA--WRETEERLAATYQAATIGIAESDADGRLLRVNDAFCTM 319
Query: 181 FGYAAEEVIGESITILIPPERLSEEPGILERIRRGELVDHFETKRRRK-DGTLVDISLTV 239
G + E+++ + + EE R GE + KR K DGT++ + +
Sbjct: 320 LGRSREQLLNMTFLDYTHEDDRDEEARCYARQVSGETDTYAIRKRAVKADGTVIYLDVYS 379
Query: 240 SPVRDATGRIIGASKIARDITETK 263
S VRD TGR ++ D+TE K
Sbjct: 380 STVRDRTGRFRYGVRVLLDVTEAK 403