Pairwise Alignments

Query, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 860 a.a., PAS domain S-box protein from Magnetospirillum magneticum AMB-1

 Score = 96.3 bits (238), Expect = 7e-24
 Identities = 81/269 (30%), Positives = 129/269 (47%), Gaps = 18/269 (6%)

Query: 26  VLDALAVPVYATDAEGIVTYCNAAAAAVAGREP-ELGKDRWCVSWQLRRPDGSPLPHDEC 84
           +LD++   +   D  G VT+ N AA+ + G  P E+             PDGS  P + C
Sbjct: 232 ILDSMGEGIIGLDTRGAVTFVNPAASEMLGFAPGEMLGQHLHPLIHHSHPDGSQYPSEHC 291

Query: 85  PMARTLKEGQPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGA---- 140
           P++RTL   +    E+    R DG+S P+    TPI +D G L GAV    DLS      
Sbjct: 292 PLSRTLASAEGCSVEDEWFWRKDGSSFPVHYGSTPIVND-GVLIGAVVTFRDLSDVTATR 350

Query: 141 KDMERSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGESITILIPPE 200
           + +E S +  ++I++++ DAI+  +  G++  +N  A+ +FG  + + +G  I  LI PE
Sbjct: 351 RALEASEQIKSSILDAAQDAIITIDRSGMVVEFNPAAEHIFGRRSSDALGHEIADLIIPE 410

Query: 201 --RLSEEPGILERIRRGE----LVDHFETKRRRKDGTLVDISLTVSPVRDATGRIIGASK 254
             R +   G L R+  G+    L    E       G  + + LT++ + D  G     + 
Sbjct: 411 IHREAHRRG-LARVASGQASSVLGKRMEMSGLHARGHEIPLELTITHLPD-HGLF---TA 465

Query: 255 IARDITETKSAAEALAARFREQAALYRLT 283
             RDITE K   EA   R ++  A+ +LT
Sbjct: 466 FIRDITEQKQ-TEAALRRSQKMEAVGQLT 493