Pairwise Alignments

Query, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 642 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  188 bits (477), Expect = 1e-51
 Identities = 131/377 (34%), Positives = 193/377 (51%), Gaps = 23/377 (6%)

Query: 531 EEVQNFEEEVRF--DDGSSRHIFGNATPLRDVTGEVVGAVAAAVDITGRKQAEEALQESE 588
           E  ++FE E R+   DGS   +  + + +RD  G +  AVA + DI  R+ A    QE E
Sbjct: 274 ETGESFEIEKRYVRGDGSLVWVLNSVSAIRDDQGNMSQAVAISADIGERRHA----QEVE 329

Query: 589 RRLQLALDAGHMGAWEWNLETGEVIWSPGLEALHRI-EPGSFGGTLADFKRDIHPDDLPL 647
           R L   + + +      +L+     W+   E L+   E    G T+     D   ++ P 
Sbjct: 330 RHLASMIASSNDAILGIDLDMTITSWNAAAEKLYGYSEDEVVGRTVLMLVPDDRQEEEPT 389

Query: 648 IEREM--ARAIETDGDYHVVYRAQLPDGTIRWMEAFGQLSPRNGPKRRLTGVCM---DIT 702
           I R++   R +E        Y  Q      R +E    +SP      R+ G      DIT
Sbjct: 390 ILRQIKAGRIVEP-------YETQRLRKDGRLVEVLLSVSPIRDVNGRVIGASKTAHDIT 442

Query: 703 ERREAEAQRNLLVAELSHRVKNTLAIVGSIARQTFSTNPDAKAAHRSFDARIRALAQTHT 762
            R++A+  R++LV EL HRVKN LA V +IARQT   +        +F +R+ +L++   
Sbjct: 443 ARKDADRLRSILVNELHHRVKNILATVTAIARQTIGRDKANHEDMEAFTSRLGSLSRAQD 502

Query: 763 RLAEASWSGVSLKTVLFDELSPYHDDSRTNVTLAGPPAMLPPKHALTLGMAAHELATNAA 822
            L  A W    L+ VL   LSPY  +S     ++GP   LPP+  ++L +A HELATNAA
Sbjct: 503 LLVHADWQHADLRAVLQQALSPYPAES---FQISGPGVSLPPRAVVSLSLALHELATNAA 559

Query: 823 KHGALSVRSGKVDIEWMID-VASERLRICWSETGGPAVVAPKHNGFGRLLLERVLASDLG 881
           K+GALSV  G+V I W       ERLR+ W E GGP V++P+  GFG  L+ER+L+++L 
Sbjct: 560 KYGALSVPEGQVSISWQRQGTDGERLRVVWEERGGPEVMSPQRKGFGSTLVERLLSAELN 619

Query: 882 GEVHLEFAPQGLVCTID 898
           GE  L +   G++C I+
Sbjct: 620 GETKLFYEKNGVICVIE 636



 Score =  150 bits (378), Expect = 3e-40
 Identities = 74/162 (45%), Positives = 112/162 (69%)

Query: 104 VRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAKDMERSSRYLAAIVESSDDAIVA 163
           VR DG+ V +L   + I DD G ++ AV +  D+   +  +   R+LA+++ SS+DAI+ 
Sbjct: 286 VRGDGSLVWVLNSVSAIRDDQGNMSQAVAISADIGERRHAQEVERHLASMIASSNDAILG 345

Query: 164 KNLDGIITSWNRGAQRLFGYAAEEVIGESITILIPPERLSEEPGILERIRRGELVDHFET 223
            +LD  ITSWN  A++L+GY+ +EV+G ++ +L+P +R  EEP IL +I+ G +V+ +ET
Sbjct: 346 IDLDMTITSWNAAAEKLYGYSEDEVVGRTVLMLVPDDRQEEEPTILRQIKAGRIVEPYET 405

Query: 224 KRRRKDGTLVDISLTVSPVRDATGRIIGASKIARDITETKSA 265
           +R RKDG LV++ L+VSP+RD  GR+IGASK A DIT  K A
Sbjct: 406 QRLRKDGRLVEVLLSVSPIRDVNGRVIGASKTAHDITARKDA 447



 Score = 45.4 bits (106), Expect = 1e-08
 Identities = 53/209 (25%), Positives = 86/209 (41%), Gaps = 21/209 (10%)

Query: 509 RVFSEGRALSPEELPVQRAARGEEVQNFEEEVRFDDGSSRHIFGNATPLRDVTGEVVGAV 568
           RV  +G  ++ ++ P      G     + E V FD   S        P+ D  G V G  
Sbjct: 141 RVLDKGETIAAKDRPFYIERHG-----YPETVYFDISYS--------PVTDQDGIVRGVF 187

Query: 569 AAAVDITGRKQAEEALQESERRLQLALDAGHMGAWEWNLETGEVIWSPG--LEALHRIEP 626
               + T R +A+ AL+ESE RL+       +G    +L TG++I       + + R   
Sbjct: 188 CIVNETTERVKADAALRESEERLRAIFAQSAVGIALGDL-TGKLISVNDHFCQIVGRRRD 246

Query: 627 GSFGGTLADFKRDIHPDDLPLIEREMARAIETDGDYHVVYRAQLPDGTIRW-MEAFGQLS 685
              G  + D       +DLP  +R     +ET   + +  R    DG++ W + +   + 
Sbjct: 247 ELIGIQMQDIT---FAEDLPENQRLFKHMVETGESFEIEKRYVRGDGSLVWVLNSVSAIR 303

Query: 686 PRNGPKRRLTGVCMDITERREA-EAQRNL 713
              G   +   +  DI ERR A E +R+L
Sbjct: 304 DDQGNMSQAVAISADIGERRHAQEVERHL 332



 Score = 45.4 bits (106), Expect = 1e-08
 Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 8/156 (5%)

Query: 118 TPIFDDTGALTGAVNVLMD----LSGAKDMERSSRYLAAIVESSDDAIVAKNLDGIITSW 173
           +P+ D  G + G   ++ +    +     +  S   L AI   S   I   +L G + S 
Sbjct: 174 SPVTDQDGIVRGVFCIVNETTERVKADAALRESEERLRAIFAQSAVGIALGDLTGKLISV 233

Query: 174 NRGAQRLFGYAAEEVIGESITILIPPERLSEEPGILERIRRGELVDHFETKRR--RKDGT 231
           N    ++ G   +E+IG  +  +   E L E   + + +   E  + FE ++R  R DG+
Sbjct: 234 NDHFCQIVGRRRDELIGIQMQDITFAEDLPENQRLFKHMV--ETGESFEIEKRYVRGDGS 291

Query: 232 LVDISLTVSPVRDATGRIIGASKIARDITETKSAAE 267
           LV +  +VS +RD  G +  A  I+ DI E + A E
Sbjct: 292 LVWVLNSVSAIRDDQGNMSQAVAISADIGERRHAQE 327



 Score = 40.0 bits (92), Expect = 5e-07
 Identities = 27/79 (34%), Positives = 35/79 (44%), Gaps = 16/79 (20%)

Query: 503 EHPTNFRVFSEGRALSPEELPVQRAARGEEVQNFEEEVRFDDGSSRHIFGNATPLRDVTG 562
           E PT  R    GR + P E   QR  +              DG    +  + +P+RDV G
Sbjct: 386 EEPTILRQIKAGRIVEPYE--TQRLRK--------------DGRLVEVLLSVSPIRDVNG 429

Query: 563 EVVGAVAAAVDITGRKQAE 581
            V+GA   A DIT RK A+
Sbjct: 430 RVIGASKTAHDITARKDAD 448



 Score = 37.0 bits (84), Expect = 4e-06
 Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 5/112 (4%)

Query: 34  VYATDAEGIVTYCNAAAAAVAGREPELGKDRWCVSWQLRRPDGSPLPHDECPMARTLKEG 93
           +   D +  +T  NAAA  + G   +    R  +   +  PD      +E  + R +K G
Sbjct: 343 ILGIDLDMTITSWNAAAEKLYGYSEDEVVGRTVL---MLVPDDRQ--EEEPTILRQIKAG 397

Query: 94  QPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAKDMER 145
           + V   E   +R DG  V +L   +PI D  G + GA     D++  KD +R
Sbjct: 398 RIVEPYETQRLRKDGRLVEVLLSVSPIRDVNGRVIGASKTAHDITARKDADR 449