Pairwise Alignments

Query, 907 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 466 a.a., two component sensor kinase from Agrobacterium fabrum C58

 Score =  150 bits (380), Expect = 1e-40
 Identities = 79/172 (45%), Positives = 109/172 (63%), Gaps = 6/172 (3%)

Query: 22  DYRAVLDALAVPVYATDAEGIVTYCNAAAAAVAGREPELGKDRWCVSWQLRRPDGSPLPH 81
           + R +L+AL   VY TDA+G +TY N AA  ++GREP +G+D WCV+++L  PDG PLPH
Sbjct: 145 EMRQILEALPAAVYTTDAQGKITYYNRAATELSGREPVVGQDEWCVTYRLFTPDGQPLPH 204

Query: 82  DECPMARTLKEGQPVRGEEVVAVRPDGASVPLLPHPTPIFDDTGALTGAVNVLMDLSGAK 141
           D+CPMA  L+E + VRG E +A RPDG  VP LP PTP+FD+ G L GA+N+L+D+S  K
Sbjct: 205 DQCPMAIALREKRAVRGVEAIAQRPDGTMVPFLPFPTPMFDEDGELIGAINMLVDISDRK 264

Query: 142 DMERSSRYLAAIVESSDDAIVAKNLDGIITSWNR-----GAQRLFGYAAEEV 188
             E + +     +       +A  L G+I S  R      A+R+ G AA+ V
Sbjct: 265 TAETNQKVFLDELNHRVKNNMAM-LYGLINSAARESRSDEARRVLGDAAQRV 315



 Score = 66.2 bits (160), Expect = 4e-15
 Identities = 81/323 (25%), Positives = 134/323 (41%), Gaps = 18/323 (5%)

Query: 526 RAARGEEVQNFEEEVRFDDGSSRHI-FGNATPLRDVTGEVVGAVAAAVDITGRKQAEEAL 584
           R + GE++  F   +R  DGS R++   ++   RD  G+ +      +D+T   Q    L
Sbjct: 82  RLSGGEKLNRFPARLRAKDGSIRYVEITSSVQFRD--GKFLNTRCFTIDVTDTVQLRRQL 139

Query: 585 QESERRLQLALDAGHMGAWEWNLETGEVIWSPGLEALHRIEPGSFGGTLADFKRDIHPDD 644
              E+ ++  L+A     +  + +     ++     L   EP           R   PD 
Sbjct: 140 ARKEQEMRQILEALPAAVYTTDAQGKITYYNRAATELSGREPVVGQDEWCVTYRLFTPDG 199

Query: 645 LPLIEREMARAI---ETDGDYHVVYRAQLPDGT-IRWMEAFGQLSPRNGPKRRLTGVCMD 700
            PL   +   AI   E      V   AQ PDGT + ++     +   +G       + +D
Sbjct: 200 QPLPHDQCPMAIALREKRAVRGVEAIAQRPDGTMVPFLPFPTPMFDEDGELIGAINMLVD 259

Query: 701 ITERREAEAQRNLLVAELSHRVKNTLA----IVGSIARQTFSTNPDAKAAHRSFDARIRA 756
           I++R+ AE  + + + EL+HRVKN +A    ++ S AR+  S + +A+        R+ A
Sbjct: 260 ISDRKTAETNQKVFLDELNHRVKNNMAMLYGLINSAARE--SRSDEARRVLGDAAQRVGA 317

Query: 757 LAQT-HTRLAEASWSGVSLKTVLFDELSPYHDDSRTNVTL--AGPPAMLPPKHALTLGMA 813
           +A    T   E   + V+ +  L    S         V L        LP    + L + 
Sbjct: 318 MAAAQQTLYMEKDRTRVNAREFLQAVCSSARLAFSKEVALHIDVDAVQLPNDVTMPLALV 377

Query: 814 AHELATNAAKHGALSVRSGKVDI 836
            +EL TNAAKHG     +GK D+
Sbjct: 378 LNELLTNAAKHGCDD--AGKCDV 398



 Score = 48.9 bits (115), Expect = 7e-10
 Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 6/141 (4%)

Query: 138 SGAKDMERSSRYLAAIVESSDDAIVAKNL---DGIITSWNRGAQRLFGYAAEEVIGESIT 194
           SG +    + +++    +  ++  VA +L   DG I   NR    L G+ AEE IG  I+
Sbjct: 8   SGVRTAVPTKQHMEDYEDFFENGAVALHLVGEDGTILRANRAELDLLGFTAEEYIGRPIS 67

Query: 195 ILIPPERLSEEPGILERIRRGELVDHFETKRRRKDGTLVDISLTVSPVRDATGRIIGASK 254
                     E  IL R+  GE ++ F  + R KDG++  + +T S V+   G+ +    
Sbjct: 68  QFHADSDTIRE--ILARLSGGEKLNRFPARLRAKDGSIRYVEIT-SSVQFRDGKFLNTRC 124

Query: 255 IARDITETKSAAEALAARFRE 275
              D+T+T      LA + +E
Sbjct: 125 FTIDVTDTVQLRRQLARKEQE 145



 Score = 45.8 bits (107), Expect = 6e-09
 Identities = 48/179 (26%), Positives = 77/179 (43%), Gaps = 17/179 (9%)

Query: 141 KDMERSSRYLAAIVESSDDAIVAKNLDGIITSWNRGAQRLFGYAAEEVIGES---ITI-L 196
           + + R  + +  I+E+   A+   +  G IT +NR A  L G   E V+G+    +T  L
Sbjct: 137 RQLARKEQEMRQILEALPAAVYTTDAQGKITYYNRAATELSG--REPVVGQDEWCVTYRL 194

Query: 197 IPPERLS---EEPGILERIRRGELVDHFETKRRRKDGTLVDISLTVSPVRDATGRIIGAS 253
             P+      ++  +   +R    V   E   +R DGT+V      +P+ D  G +IGA 
Sbjct: 195 FTPDGQPLPHDQCPMAIALREKRAVRGVEAIAQRPDGTMVPFLPFPTPMFDEDGELIGAI 254

Query: 254 KIARDITETKSA-------AEALAARFR-EQAALYRLTERVQRTKRIEEVYEATLDAIQ 304
            +  DI++ K+A        + L  R +   A LY L     R  R +E      DA Q
Sbjct: 255 NMLVDISDRKTAETNQKVFLDELNHRVKNNMAMLYGLINSAARESRSDEARRVLGDAAQ 313