Pairwise Alignments

Query, 261 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 501 a.a., fused D-ribose transporter subunits of ABC superfamily: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  175 bits (444), Expect = 1e-48
 Identities = 93/256 (36%), Positives = 160/256 (62%), Gaps = 4/256 (1%)

Query: 8   LVEMKNISISFGGIHAVDDASVDLYPGEVVALLGHNGAGKSTLIKILSGAYKRDAGEILI 67
           L+++K I  +F G+ A+  A++++YPG V+AL+G NGAGKST++K+L+G Y RDAG +L 
Sbjct: 4   LLQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLW 63

Query: 68  NGEPAEINNPRDAKKYGIETIYQTLAVADNVDAAANLYLGRELRTPWGTLDDVAMEAKAR 127
            G+      P+ +++ GI  I+Q L +   +  A N++LGRE    +G +D   M A+A 
Sbjct: 64  LGKETTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEAD 123

Query: 128 EVMGRLNPNFQRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGE 187
           +++ +LN  F+  K  V  LS G +Q V IA+ + F+++++IMDEPT AL   ET  +  
Sbjct: 124 KLLAKLNLRFKSDK-LVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFR 182

Query: 188 LIKQLKREGIGIFLISHDIHDVFDLADRVSVMKNGQVVGHARTEDVTKDEVLGMIIMGKV 247
           +I++LK +G GI  ISH + ++F++ D V+V ++GQ +       +T+D ++ M++  K+
Sbjct: 183 VIRELKSQGRGIVYISHRMKEIFEICDDVTVFRDGQFIAEREVASLTEDSLIEMMVGRKL 242

Query: 248 P---PKAIPGPGAMQM 260
               P     PG +++
Sbjct: 243 EDQYPHLDKAPGDIRL 258



 Score =  109 bits (272), Expect = 1e-28
 Identities = 69/233 (29%), Positives = 118/233 (50%), Gaps = 14/233 (6%)

Query: 24  VDDASVDLYPGEVVALLGHNGAGKSTLIKILSGAYKRDAGEILINGEPAEINNPRDAKKY 83
           V+D S  L  GE++ + G  GAG++ L+K+L GA  R +G + ++G      +P+D    
Sbjct: 268 VNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPRTSGYVTLDGHEVVTRSPQDGLAN 327

Query: 84  GIETIYQT---------LAVADNVDAAANLYLGRELRTPWGTLDDVAMEAKAREVMGRLN 134
           GI  I +          ++V +N+   A  Y  R      G+L     +    + +   N
Sbjct: 328 GIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRA----GGSLKHADEQQAVSDFIRLFN 383

Query: 135 PNFQRFKEPVKALSGGQRQSVAIARAILFDARILIMDEPTAALGPQETAQVGELIKQLKR 194
                 ++ +  LSGG +Q VAIAR ++   ++LI+DEPT  +      ++ +LI Q K 
Sbjct: 384 VKTPSMEQAIGLLSGGNQQKVAIARGLMTRPKVLILDEPTRGVDVGAKKEIYQLINQFKA 443

Query: 195 EGIGIFLISHDIHDVFDLADRVSVMKNGQVVGHARTEDVTKDEVLGMIIMGKV 247
           +G+ I L+S ++ +V  ++DR+ VM  G + G    E  T+ EVL    +GK+
Sbjct: 444 DGLSIILVSSEMPEVLGMSDRIIVMHEGHLSGEFTREQATQ-EVLMAAAVGKL 495