Pairwise Alignments

Query, 345 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

Subject, 356 a.a., L-arabinose ABC transporter, substrate-binding protein AraF from Variovorax sp. SCN45

 Score =  141 bits (356), Expect = 2e-38
 Identities = 107/328 (32%), Positives = 167/328 (50%), Gaps = 26/328 (7%)

Query: 27  VIGVSWSNFQEERWKTDEAAIKAALEASGDKYISADAQSSAAKQLTDIESLIAQGANALI 86
           +I +S       RW  D A ++   +  G K     A      QL  IE+++ +G+  L+
Sbjct: 31  LIAISMPTKSSARWIADGANMQKYFKDKGYKTDLQYADDDIPNQLAQIENMVTKGSKVLV 90

Query: 87  VLAQDSDAIGPAIEKAAAEGIPVVGYDRLI---ENPDAFYITFDNKEVGRLQAREV---- 139
           + A D   +   ++KAA +G+ V+ YDRLI   +N D +Y TFDN +VG LQA+ +    
Sbjct: 91  IAAIDGTTLSDVLQKAADKGVKVIAYDRLIKGSKNVD-YYATFDNFQVGVLQAQSIEAAL 149

Query: 140 --FKQKPEGNFVFIKGSSADPNADFLFSGQLEVLKEAIDAGKI----KNVG--EAYTDGW 191
                K   N     GS  D NA F ++G + VL   I +GK+    K +G  +  T  W
Sbjct: 150 GLKSGKGPFNIELFGGSPDDNNAFFFYNGAMSVLDPYIKSGKLVVRSKQMGMDKVGTLRW 209

Query: 192 KPENAQKNMEQFLTA--NDNKVDAVVASNDGTAGGAIAALDAQGL-AGSVP---VSGQDA 245
               AQ  M+  L+A    ++VDAV++  DG + G +++L   G  +GS P   VSGQDA
Sbjct: 210 DGAVAQARMDNLLSAYYTKDRVDAVLSPYDGLSIGILSSLKGVGYGSGSQPMPVVSGQDA 269

Query: 246 DKAALNRVALGTQTVSVWKDSRELGKKAAEIAVALAGGKTMDEVEGVQTFNGGPKGVAMK 305
           +  ++  +    QT +V+KD+REL K    +  A+  GK   EV   +T+N G K   + 
Sbjct: 270 EVPSIKSILRKEQTSTVFKDTRELAKVTVSMVDAMLSGK-QPEVNDTKTYNNGIK--VVP 326

Query: 306 SVFLAPLAITKDNLNVV-IDAGWISKEE 332
           S  L P+++   N  VV ID+G+  + +
Sbjct: 327 SYLLKPVSVDASNWKVVLIDSGYYKESQ 354