Pairwise Alignments

Query, 345 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

Subject, 313 a.a., ABC transporter substrate binding protein from Agrobacterium fabrum C58

 Score = 97.8 bits (242), Expect = 3e-25
 Identities = 101/331 (30%), Positives = 156/331 (47%), Gaps = 37/331 (11%)

Query: 1   MKSILKLMAGAAIIASMHSAAIAKDLVIGVSWSNFQEERWKT-DEAAIKAALEASGDKYI 59
           MK    + A AA++A+  SA       +GVS + F +          I  +   +G    
Sbjct: 1   MKRHFAIAAFAAMLATGASAQ-----TVGVSMALFDDNFLTVLRNGMIDYSKGMNGVSLQ 55

Query: 60  SADAQSSAAKQLTDIESLIAQGANALIVLAQDSDAIGPAIEKAAAEGIPVVGYDRLIENP 119
             DAQ+   KQL+ +++ +A G +A+IV   D+DA     + AAA GIP+V  +R   N 
Sbjct: 56  VEDAQNDVGKQLSQVQNFVAAGVDAIIVNPVDTDATVALSQAAAAAGIPLVYVNRQPVNL 115

Query: 120 DAF-----YITFDNKEVGRLQAREV---FKQ--KPEGNFVFIKGSSADPNADFLFSGQLE 169
           D+      ++  D K+ G LQ +EV    KQ  K +   V + G  ++  A        +
Sbjct: 116 DSLPDKQAFVASDEKQSGTLQTQEVCRLLKQAGKTDAKAVVMMGELSNQAARMRTQDIKD 175

Query: 170 VLKEAIDAGKIKNVGEAYTDGWKPENAQKNMEQFLTANDNKVDAVVASNDGTAGGAIAAL 229
           V+    D   IK V E  +  W        M  +L+A   + DAV+++ND  A GAI +L
Sbjct: 176 VVATP-DCSFIKLV-EEQSANWSRTQGSDLMTNWLSAG-VEFDAVISNNDEMAIGAIQSL 232

Query: 230 DAQGLA-GSVPVSGQDADKAALNRVALGTQTVSVWKDSRELGKKAAEIAVALAGGKTMDE 288
            A G +  SV ++G DA + AL  +A G   VSV++++   GK A + A+ LA G+T+D 
Sbjct: 233 KAAGRSMDSVIIAGIDATQDALAAMAAGDLDVSVFQNAAGQGKGALDAALKLAKGETID- 291

Query: 289 VEGVQTFNGGPKGVAMKSVFLAPLAITKDNL 319
                           K VF+    +T DNL
Sbjct: 292 ----------------KKVFVPFELVTPDNL 306