Pairwise Alignments

Query, 345 a.a., sugar uptake ABC transporter substrate-binding protein precursor from Sinorhizobium meliloti 1021

Subject, 354 a.a., sugar binding protein from Agrobacterium fabrum C58

 Score =  165 bits (417), Expect = 2e-45
 Identities = 119/355 (33%), Positives = 182/355 (51%), Gaps = 26/355 (7%)

Query: 1   MKSILKLMAGAAI-IASMHSAAIAKDL-VIGVSWSNFQEERWKTDEAAIKAALEASGDKY 58
           MKSI+ LMA  AI  AS  + A A+D   +G++       RW  D   I   L+ +G K 
Sbjct: 1   MKSIISLMAACAIGAASFAAPAFAQDKGSVGIAMPTKSSARWIDDGNNIVKQLQEAGYKT 60

Query: 59  ISADAQSSAAKQLTDIESLIAQGANALIVLAQDSDAIGPAIEKAAAEGIPVVGYDRLIEN 118
               A      QL+ IE+++ +G   L++ + D   +   +++A  +GI V+ YDRLI N
Sbjct: 61  DLQYADDDIPNQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLIRN 120

Query: 119 PD--AFYITFDNKEVGRLQAREVFKQ------KPEGNFVFIKGSSADPNADFLFSGQLEV 170
               ++Y TFDN +VG LQA  +  +      K   N     GS  D NA F + G + V
Sbjct: 121 SGDVSYYATFDNFQVGVLQATSITDKLGLKDGKGPFNIELFGGSPDDNNAFFFYDGAMSV 180

Query: 171 LKEAIDAGKI------KNVGEAYTDGWKPENAQKNMEQFLTA--NDNKVDAVVASNDGTA 222
           LK  ID+GK+        + +  T  W P  AQ  M+  L+A   D KVDAV++  DG +
Sbjct: 181 LKPYIDSGKLVVKSGQMGMDKVGTLRWDPATAQARMDNLLSAYYTDAKVDAVLSPYDGLS 240

Query: 223 GGAIAALDAQGLAGS---VP-VSGQDADKAALNRVALGTQTVSVWKDSRELGKKAAEIAV 278
            G I++L   G       +P VSGQDA+  ++  +  G Q  +++KD+REL K    +  
Sbjct: 241 IGIISSLKGVGYGTKDQPLPVVSGQDAEVPSVKSIIAGEQYSTIFKDTRELAKVTVNMVN 300

Query: 279 ALAGGKTMDEVEGVQTFNGGPKGVAMKSVFLAPLAITKDNL-NVVIDAGWISKEE 332
           A+  GK   EV   +T+  G K   + S  L P+A+TK+N   V++D G+  +++
Sbjct: 301 AVMEGKE-PEVNDTKTYENGVK--VVPSYLLKPVAVTKENYKQVLVDGGYYKEDQ 352