Pairwise Alignments
Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 958 a.a., Sensor histidine kinase RcsC from Xanthobacter sp. DMC5
Score = 129 bits (323), Expect = 2e-33
Identities = 116/438 (26%), Positives = 188/438 (42%), Gaps = 71/438 (16%)
Query: 846 IDIEEEMRAQEALRERERFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELEELDG 905
++I E RA++A+ E+ L E LP M+ ++P G Y + + ++ G E
Sbjct: 257 VEITERKRAEKAIAASEQRYRLLAEALPKMVWTSSPAGTGDYYNHRWAEYTGVE------ 310
Query: 906 GAKSRLDATLDAGVHPDDLAGVKEQYARSLESGEPYRRKHRLRRFDGEYRWIETRAAPMR 965
A A +HP++ G+ + SL SG P+ R+ R R DG YRW RA P+R
Sbjct: 311 -APPGEVVEWHAFLHPEEKGGIMGAWEASLASGNPFSRECRFRAKDGSYRWFLCRAVPVR 369
Query: 966 DEKGAIVQWNVICLDVDREV---------------------------------RMQEELR 992
DE G + +W C D+ V M+E LR
Sbjct: 370 DEDGRVDRWYGSCTDISEIVAAREALSRTNEDLERLAAARTMQLAETNTLLKQEMEERLR 429
Query: 993 LAQERLARAGQAASLAELSASIAHEVNQPLAAIVANSHACYRWLSADPVNIERAKITTER 1052
A+ +L +A + ++ +L+ IAH+ N L I+ N A R + ADP + +I T+
Sbjct: 430 -AESQLRQAQKMEAVGQLTGGIAHDFNNLLTIIIGNIEAAERRVPADPQDTRTQEIKTQE 488
Query: 1053 VIR-------DAKSAADVVSRIRALF-KQSVENRGILVLSDVISEACSLVAAEALRRRIR 1104
+ R A AA + R+ A +Q ++ R V + + S + AL R+
Sbjct: 489 IRRFLDYGRQGALRAAILTQRLLAFSRRQPLDPRPTDV--NRLVTGMSHMLRSALGERVM 546
Query: 1105 LNIDVETNLAPVTVDRIQVQQVLVNLIRNGMEAMDAVDDNK-TVDVRMHQVDDE------ 1157
+ + L +D Q++ ++NL N +AM +D K T++ +D+
Sbjct: 547 VETVLAGGLWRTEIDHNQLENAILNLAVNARDAM--MDGGKLTIETANAYLDEAYCAEHE 604
Query: 1158 -------VRIEIGDNGNGVA--FPERIFEPFFTTK--ENGMGMGLAISRSIVEAHGGRLW 1206
V I + D G G++ R FEPFFTTK ++G G+GL+ V+ GG +
Sbjct: 605 DLEPGQYVAIFVSDTGMGMSDDVRARAFEPFFTTKGPKDGTGLGLSQVYGFVKQSGGHVM 664
Query: 1207 AEKNEPRGARFVFTLPNV 1224
G LP +
Sbjct: 665 IYSERGDGTTVKLYLPRL 682
Score = 110 bits (275), Expect = 6e-28
Identities = 65/180 (36%), Positives = 97/180 (53%), Gaps = 12/180 (6%)
Query: 580 SLVGFI--DITERKRAEEALRAREREFSQLVNMVPSYLWRLTPDGVPNFLNQRLIDFLGP 637
+LVG I +ITERKRAE+A+ A E+ + L +P +W +P G ++ N R ++ G
Sbjct: 250 NLVGMIVVEITERKRAEKAIAASEQRYRLLAEALPKMVWTSSPAGTGDYYNHRWAEYTGV 309
Query: 638 DVVNANVEGVHPLAAIIGAVVHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYRWVE 697
+ V H A +HP++K + A S+A+G FS + R R DG YRW
Sbjct: 310 EAPPGEVVEWH-------AFLHPEEKGGIMGAWEASLASGNPFSRECRFRAKDGSYRWFL 362
Query: 698 GSAEPMRDEEGRILQWYGLSHDIDDIMHVEEALRNSKQQLEQMIEAVPFSTLSFAPTGEL 757
A P+RDE+GR+ +WYG DI +I+ EAL + + LE++ A T+ A T L
Sbjct: 363 CRAVPVRDEDGRVDRWYGSCTDISEIVAAREALSRTNEDLERLAAA---RTMQLAETNTL 419
Score = 82.8 bits (203), Expect = 1e-19
Identities = 82/299 (27%), Positives = 136/299 (45%), Gaps = 18/299 (6%)
Query: 580 SLVGFIDITERK--RAEEALRAREREFSQLVNMVPSYLWRLTPDGVPNFLNQRLIDFLGP 637
++ G + T R+ A AL + E + +V + + L P G F QR F+
Sbjct: 115 AIAGLVRTTLRRLDSAHAALLSAASEQTAVVATLEALLQH-APVGFAFFDAQRR--FIRV 171
Query: 638 DVVNANVEGVHPLAAIIG---AVVHPDDKTRMSNALFHSVATGERFS---MKYRLRRADG 691
+ + A ++G+ P G A + P ++ +L +ATGE + ++ A G
Sbjct: 172 NEMLARIDGI-PAREHAGRSLADMLPQLADAVTPSLERVLATGEVIADVELEGATPAAPG 230
Query: 692 VYRWVEGSAEPMRDEEGRILQWYGLSHDIDDIMHVEEALRNSKQQLEQMIEAVPFSTLSF 751
V+R S P+R I + +I + E+A+ S+Q+ + EA+P +
Sbjct: 231 VWRHFLVSYFPVRTSSEAINLVGMIVVEITERKRAEKAIAASEQRYRLLAEALPKMVWTS 290
Query: 752 APTGELTYVSKRYQDQAG--APGAEIKDFDALAREVAHPDDFPTMFARATQGFATGQPFV 809
+P G Y + R+ + G AP E+ ++ A HP++ + A+G PF
Sbjct: 291 SPAGTGDYYNHRWAEYTGVEAPPGEVVEWHAFL----HPEEKGGIMGAWEASLASGNPFS 346
Query: 810 NRFRRRLKDGNYRWIEARAQPLRRADGPIVQWYFASIDIEEEMRAQEALRERERFLWQL 868
R R KDG+YRW RA P+R DG + +WY + DI E + A+EAL L +L
Sbjct: 347 RECRFRAKDGSYRWFLCRAVPVRDEDGRVDRWYGSCTDISEIVAAREALSRTNEDLERL 405
Score = 75.9 bits (185), Expect = 2e-17
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 10/176 (5%)
Query: 302 QQSVATLRERERELSQIVNMVPVHIRRLTPEGEPTFFNKRLTDFFGLDLQQLEKPNASRL 361
++++A +R R L++ + P + +P G ++N R ++ G++ E
Sbjct: 266 EKAIAASEQRYRLLAEAL---PKMVWTSSPAGTGDYYNHRWAEYTGVEAPPGE------- 315
Query: 362 VTAVQTLVHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGTI 421
V +HP++ ++ A SLA+G P+S + R R DG+YRW RA P+RD+ G +
Sbjct: 316 VVEWHAFLHPEEKGGIMGAWEASLASGNPFSRECRFRAKDGSYRWFLCRAVPVRDEDGRV 375
Query: 422 LQWFAISIDIDDEVRMQEALKQSERRYRELFHYMPIGLAQIDAGKLIPMFKEMRAQ 477
+W+ DI + V +EAL ++ L + LA+ + M + +RA+
Sbjct: 376 DRWYGSCTDISEIVAAREALSRTNEDLERLAAARTMQLAETNTLLKQEMEERLRAE 431
Score = 36.2 bits (82), Expect = 1e-05
Identities = 63/266 (23%), Positives = 101/266 (37%), Gaps = 56/266 (21%)
Query: 371 PDDADSLLQAVRRSLATGEPYS---IKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAI 427
P AD++ ++ R LATGE + ++ A G +R P+R S I I
Sbjct: 196 PQLADAVTPSLERVLATGEVIADVELEGATPAAPGVWRHFLVSYFPVRTSSEAINLVGMI 255
Query: 428 SIDIDDEVRMQEALKQSERRYRELFHYMPIGLAQIDAGKLIPMFKEMRAQGVVSLETYMD 487
++I + R ++A+ SE+RYR L +P K + Y +
Sbjct: 256 VVEITERKRAEKAIAASEQRYRLLAEALP---------------KMVWTSSPAGTGDYYN 300
Query: 488 ENPEFLSHALEALEVEEVNQHVIDMFRANSREEMGGSITRYWQPALATIRR-SIEARYRG 546
E VE V++ EE GG I W+ +LA+ S E R+R
Sbjct: 301 H------RWAEYTGVEAPPGEVVEWHAFLHPEEKGG-IMGAWEASLASGNPFSRECRFRA 353
Query: 547 EE------------VFQEETRVARMDGSVMDVV------------------FAIAQPGAI 576
++ V E+ RV R GS D+ A A+ +
Sbjct: 354 KDGSYRWFLCRAVPVRDEDGRVDRWYGSCTDISEIVAAREALSRTNEDLERLAAARTMQL 413
Query: 577 ADKSLVGFIDITERKRAEEALRARER 602
A+ + + ++ ER RAE LR ++
Sbjct: 414 AETNTLLKQEMEERLRAESQLRQAQK 439