Pairwise Alignments
Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 908 a.a., histidine kinase from Pseudomonas simiae WCS417
Score = 144 bits (364), Expect = 3e-38
Identities = 166/602 (27%), Positives = 268/602 (44%), Gaps = 76/602 (12%)
Query: 656 AVVHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYR--WVEGSAEPMRDEEGRILQW 713
A++HP D+ +++ L A G+ RL+R+D + W + + + R +W
Sbjct: 346 ALIHPADRQALTSRLHDLQALGKPLLTSVRLQRSDAEQKPLWYRVQGQVLGVGDNR--RW 403
Query: 714 YGLSHDIDDIMHVEEALRNSKQQLEQMIEAVPFSTLSFAPTGELTYVSKRYQDQAGAP-- 771
G DI DI + + + +L+ +I + P + YV +RY A P
Sbjct: 404 IGFMLDISDIKNQQLQAAAAHARLDNLIASSP----------AVIYV-QRYVSGALHPAF 452
Query: 772 ---------GAEIKD--FDALAREVAHPDDFPTMFARATQGFATGQPFVNRFRRRLKDGN 820
G + D D+LA + HP D F R+ Q G +R+R R K G+
Sbjct: 453 FSDSLLPLLGWTLADCNHDSLA-SLIHPQDRELYFERSRQLLREGS-VRSRYRLRDKQGH 510
Query: 821 YRWIEARAQPLRRADGPIVQWYFASIDIEEEMRAQEALRERERFLWQLVETLPAMIDCAA 880
Y W+ A+ LR G ++ +D+ + A E +++ E LVE PAMI
Sbjct: 511 YHWLLDEAKLLRDDLGLPLEAVGLWLDVTDATLAAEHIKQSEERYRILVEDSPAMICRYR 570
Query: 881 PNGEPVYRSQQLRDFLGYELEELDGGAKSRLDATLDAGVHPDDLAGVKEQYARSLESGEP 940
P+ + + L ++L E+L G L+ G D ++ +A + P
Sbjct: 571 PDLTLTFGNTPLANYLECPPEQLPG---------LNLGDWLSDEQ--RQAFAHRIGQLSP 619
Query: 941 Y----RRKHRLRRFDGEYRWIETRAAPMRDEKGAIVQWNVICLDVDREVRMQEELRLAQE 996
+ L E+ W + DE+GA+V+ + D E+R +Q+
Sbjct: 620 EFPVSTAEISLELPGREHAWWVWSDRGVFDEQGALVEVQAVGRD-------NTEVRRSQQ 672
Query: 997 RLARAGQAASLAELSASIAHEVNQPLAAIVANSHACYRWLSADPVNIERAKITTERVIRD 1056
+L ++ + A+L E++ +AHE+NQPL + + LS I+ +R+
Sbjct: 673 QLTQSAKMATLGEMATGLAHEINQPLNVMRMAIVNVLKRLSNGDAQIDYLTEKLQRIDTQ 732
Query: 1057 AKSAADVVSRIRALFKQSVENRGILVLSDVISEACSLVAAEALRRRIRLNIDVETNLAPV 1116
+ AA VV +R ++S + S + SL+ + LR + +DV A
Sbjct: 733 VQRAARVVDHMRVFGRRSEIEQQPFDPSQAVEGTLSLL-GDGLRGK---GVDVRITPADF 788
Query: 1117 TVD----RIQVQQVLVNLIRNGMEAMDAVDDNKTVD------VRMHQVDD--EVRIEIGD 1164
TV Q++QVL+NL+ N A DA+ + D + +H D VRI + D
Sbjct: 789 TVQVKGHVDQLEQVLINLMVN---ARDALLSKRQKDPEFRPWIAVHCEHDSRHVRIWVED 845
Query: 1165 NGNGV--AFPERIFEPFFTTKENGM--GMGLAISRSIVEAHGGRLWAEKNEPRGARFVFT 1220
NG+G+ ERIFEPFFTTK G+ G+GL++S IVE GGRL + N +GARF
Sbjct: 846 NGDGIDPRLLERIFEPFFTTKPIGVGTGLGLSVSYGIVENMGGRL-SVANAEQGARFCVE 904
Query: 1221 LP 1222
LP
Sbjct: 905 LP 906
Score = 62.0 bits (149), Expect = 2e-13
Identities = 45/166 (27%), Positives = 71/166 (42%), Gaps = 11/166 (6%)
Query: 294 YQLALSNLQQSVATLRERERELSQIVNMVPVHI---RRLTPEGEPTFFNKRLTDFFGLDL 350
+ L +S+++ L ++ P I R ++ P FF+ L G L
Sbjct: 406 FMLDISDIKNQQLQAAAAHARLDNLIASSPAVIYVQRYVSGALHPAFFSDSLLPLLGWTL 465
Query: 351 QQLEKPNASRLVTAVQTLVHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGR 410
+ + +L+HP D + + R+ L G S +YR+R G Y W+
Sbjct: 466 ADCNHDSLA-------SLIHPQDRELYFERSRQLLREGSVRS-RYRLRDKQGHYHWLLDE 517
Query: 411 AEPLRDDSGTILQWFAISIDIDDEVRMQEALKQSERRYRELFHYMP 456
A+ LRDD G L+ + +D+ D E +KQSE RYR L P
Sbjct: 518 AKLLRDDLGLPLEAVGLWLDVTDATLAAEHIKQSEERYRILVEDSP 563
Score = 53.9 bits (128), Expect = 6e-11
Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 12/182 (6%)
Query: 582 VGF-IDITERKRAEEALRAREREFSQLVNMVPS--YLWRLTPDGV-PNFLNQRLIDFLGP 637
+GF +DI++ K + A L+ P+ Y+ R + P F + L+ LG
Sbjct: 404 IGFMLDISDIKNQQLQAAAAHARLDNLIASSPAVIYVQRYVSGALHPAFFSDSLLPLLGW 463
Query: 638 DVVNANVEGVHPLAAIIGAVVHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYRWVE 697
+ + N + + +++HP D+ + G S +YRLR G Y W+
Sbjct: 464 TLADCNHDS-------LASLIHPQDRELYFERSRQLLREGSVRS-RYRLRDKQGHYHWLL 515
Query: 698 GSAEPMRDEEGRILQWYGLSHDIDDIMHVEEALRNSKQQLEQMIEAVPFSTLSFAPTGEL 757
A+ +RD+ G L+ GL D+ D E ++ S+++ ++E P + P L
Sbjct: 516 DEAKLLRDDLGLPLEAVGLWLDVTDATLAAEHIKQSEERYRILVEDSPAMICRYRPDLTL 575
Query: 758 TY 759
T+
Sbjct: 576 TF 577
Score = 34.7 bits (78), Expect = 4e-05
Identities = 76/398 (19%), Positives = 146/398 (36%), Gaps = 65/398 (16%)
Query: 368 LVHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAI 427
L+HP D +L + A G+P R++R+D + + R + G +W
Sbjct: 347 LIHPADRQALTSRLHDLQALGKPLLTSVRLQRSDAEQKPLWYRVQGQVLGVGDNRRWIGF 406
Query: 428 SIDIDDEVRMQEALKQSERRYRELFHYMP--IGLAQIDAGKLIPMFKEMRAQGVVSLETY 485
+DI D Q + R L P I + + +G L P F ++ T
Sbjct: 407 MLDISDIKNQQLQAAAAHARLDNLIASSPAVIYVQRYVSGALHPAFFSDSLLPLLGW-TL 465
Query: 486 MDENPEFLSHALEALEVEEVNQHVIDMFRANSREEMGGSITRYWQPALATIRR-SIEARY 544
D N + L+ + + E Y++ + +R S+ +RY
Sbjct: 466 ADCNHDSLASLIHPQDRE-----------------------LYFERSRQLLREGSVRSRY 502
Query: 545 RGEEV------FQEETRVARMD-GSVMDVVFAIAQPGAIADKSLVGFIDITERKRAEEAL 597
R + +E ++ R D G ++ V ++D+T+ A E +
Sbjct: 503 RLRDKQGHYHWLLDEAKLLRDDLGLPLEAVGL--------------WLDVTDATLAAEHI 548
Query: 598 RAREREFSQLVNMVPSYLWRLTPDGVPNFLNQRLIDFLGPDVVNANVEGVHPLAAIIGAV 657
+ E + LV P+ + R PD F N L ++L + + G++ +G
Sbjct: 549 KQSEERYRILVEDSPAMICRYRPDLTLTFGNTPLANYL--ECPPEQLPGLN-----LGDW 601
Query: 658 VHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYRWVEGSAEPMRDEEGRILQWYGLS 717
+ + + ++ + + + L + W S + DE+G +++ +
Sbjct: 602 LSDEQRQAFAHRIGQLSPEFPVSTAEISLELPGREHAWWVWSDRGVFDEQGALVEVQAVG 661
Query: 718 HDIDDIMHVEEALRNSKQQLEQMIEAVPFSTLSFAPTG 755
D ++ R S+QQL Q + +TL TG
Sbjct: 662 RDNTEV-------RRSQQQLTQ---SAKMATLGEMATG 689