Pairwise Alignments

Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 846 a.a., Probable two-component transmembrane sensor histidine kinase transcription regulator protein (EC 2.7.3.-) from Variovorax sp. SCN45

 Score =  150 bits (380), Expect = 3e-40
 Identities = 123/438 (28%), Positives = 201/438 (45%), Gaps = 27/438 (6%)

Query: 805  GQPFVNRFRRRLKDGNYRWIEAR--AQPLRRADGPIVQWYFASIDIEEEMRAQEALRERE 862
            G+     F+ R+K  N     AR    PL  A G    W  +  DI E  R +E L    
Sbjct: 399  GRALPGGFQVRVKRKNGSVFNARLYVSPLIDARGHQTGWMTSMTDITEPTRIREQLSASY 458

Query: 863  RFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELEELDGGAKSRLDATLDAGV--- 919
                 ++E L A +  A    E +  + +L     Y L          L     AGV   
Sbjct: 459  ERFTTVLEALDAAVSVAPIGSEELLFANKL-----YRLW-FGSDTVGHLGMVAQAGVPAS 512

Query: 920  --HPDDLAGVKEQYARSLESGEPYRRKHRLRRFDGEYRWIETRAAPMRDEKGAIVQWNVI 977
              H + L  V       +++    +  +         +W+E R+  +    G + Q  VI
Sbjct: 513  NAHDEGLDDVDPYAGLPIDTLTAAQTANNEIFVPHLGKWLEVRSRYLTWVDGRLAQL-VI 571

Query: 978  CLDVDREVRMQEELRLAQERLARAGQAASLAELSASIAHEVNQPLAAIVANSHACYRWLS 1037
              D+      +E+     ++   A +  ++ E+++S+AHE+NQPL AI    +     + 
Sbjct: 572  ATDITPRRDAEEQAAAQADKAQAASRLITMGEMASSVAHELNQPLTAITNYCNGMMSRIK 631

Query: 1038 ADPVNIERAKITTERVIRDAKSAADVVSRIRALFKQSVENRGILVLSDVISEACSLVAAE 1097
               ++ E      E+  + A+ A  ++ RIR+  K+S  NR    ++ ++SEA  L   E
Sbjct: 632  GQTIDTEALLAALEKTSKQAQRAGQIIQRIRSFVKRSEPNRTPADVATMVSEAVELAGIE 691

Query: 1098 ALRRRIRLNIDVETNLAPVTVDRIQVQQVLVNLIRNGMEAMDAVD---DNKTVDVR---- 1150
              RR +RLN  V   L  V VD I ++QV+VNL++N  E++D  D     ++V++R    
Sbjct: 692  LRRRNVRLNHYVAARLPVVRVDPILIEQVMVNLLKNAAESIDIADRPLARRSVELRVLPK 751

Query: 1151 MHQVDDEVRIEIGDNGNGVA--FPERIFEPFFTTKENGMGMGLAISRSIVEAHGGRLWAE 1208
            + +  + +   + D G G+A    +R++E FF+TK  GMG+GL + R+IVE+H GR+ AE
Sbjct: 752  VIEGHNAIEFSVQDTGKGLAPEVMDRLYEAFFSTKPEGMGIGLNLCRTIVESHRGRMQAE 811

Query: 1209 K--NEPR--GARFVFTLP 1222
               N P   G RF F +P
Sbjct: 812  NIYNGPDVIGCRFSFWIP 829



 Score = 36.2 bits (82), Expect = 1e-05
 Identities = 49/194 (25%), Positives = 76/194 (39%), Gaps = 37/194 (19%)

Query: 685 RLRRADGVYRWVEGSAEPMRDEEGRILQWYGLSHDIDDIMHVEEALRNSKQQLEQMIEAV 744
           R++R +G          P+ D  G    W     DI +   + E L  S ++   ++EA+
Sbjct: 409 RVKRKNGSVFNARLYVSPLIDARGHQTGWMTSMTDITEPTRIREQLSASYERFTTVLEAL 468

Query: 745 PFSTLSFAPTG--ELTYVSKRYQ--------------DQAGAPGAEIKD--FDALAREVA 786
             + +S AP G  EL + +K Y+               QAG P +   D   D +     
Sbjct: 469 D-AAVSVAPIGSEELLFANKLYRLWFGSDTVGHLGMVAQAGVPASNAHDEGLDDVDPYAG 527

Query: 787 HPDDFPTMFARATQGFATGQPFVNRFRRRLKDGNYRWIEARAQPLRRADGPIVQWYFAS- 845
            P D  T+ A  T   A  + FV    +        W+E R++ L   DG + Q   A+ 
Sbjct: 528 LPID--TLTAAQT---ANNEIFVPHLGK--------WLEVRSRYLTWVDGRLAQLVIATD 574

Query: 846 ----IDIEEEMRAQ 855
                D EE+  AQ
Sbjct: 575 ITPRRDAEEQAAAQ 588



 Score = 27.3 bits (59), Expect = 0.006
 Identities = 19/81 (23%), Positives = 35/81 (43%), Gaps = 2/81 (2%)

Query: 390 PYSIKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAISIDIDDEVRMQEALKQSERRYR 449
           P   + R++R +G+         PL D  G    W     DI +  R++E L  S  R+ 
Sbjct: 403 PGGFQVRVKRKNGSVFNARLYVSPLIDARGHQTGWMTSMTDITEPTRIREQLSASYERFT 462

Query: 450 ELFHYM--PIGLAQIDAGKLI 468
            +   +   + +A I + +L+
Sbjct: 463 TVLEALDAAVSVAPIGSEELL 483