Pairwise Alignments

Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 684 a.a., Two-component system sensor histidine kinase/response regulator hybrid from Variovorax sp. SCN45

 Score =  144 bits (362), Expect = 3e-38
 Identities = 113/395 (28%), Positives = 182/395 (46%), Gaps = 23/395 (5%)

Query: 847  DIEEEMRAQEALRERERFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELEELDGG 906
            D    +RA+  L +   F   + +++   +      G   Y +    + +G+  EEL  G
Sbjct: 291  DTRRRLRAERDLADALAFRKAMEDSVITGLRARDLQGRITYVNPAFCEMVGFSPEELMAG 350

Query: 907  AKSRLDATLDAGVHPDDLAGVKEQ-YARSLESGEPYRRKHR--LRRFDGEYRWIETRAAP 963
                 DA       P +LA   +Q  AR L  G P R        R DG    +    AP
Sbjct: 351  NAEAPDAPY----WPTELAHEYQQRQARRLAGGMPPREGFESVFMRKDGTRFPVLIFEAP 406

Query: 964  MRDEKGAIVQWNVICLDVDREVRMQEELRLAQERLARAGQAASLAELSASIAHEVNQPLA 1023
            + +       W    +DV  + R++E  R +QERL  + + A++ E+++ ++HE+ QPLA
Sbjct: 407  LINAHKVQTGWMSAFIDVSEQRRIEELSRASQERLQASARLATVGEMASLLSHELTQPLA 466

Query: 1024 AIVANSHACYRWLSADPVNIE-RAKITTERVIRDAKSAADVVSRIRALFKQSVENRGILV 1082
            AI + +      L       +    +   R+   A  A  V+  +    ++    R  + 
Sbjct: 467  AIASYASGSLNLLGPHARGDQGEVAMAVRRIAEQADRAGQVIRSVHDFVRRRDRTREPVA 526

Query: 1083 LSDVISEACSLVAAEALRRRIRLNIDVETNLAPVTVDRIQVQQVLVNLIRNGMEAMDAVD 1142
               +I     LV  +A +  + + +  E  L     DR  V+QVL+NL RN M+AMD+ D
Sbjct: 527  PQALIDAVLPLVRLQARKLGVIIEVVFEDRLPAAMCDRTLVEQVLLNLARNAMQAMDSPD 586

Query: 1143 DNKTVDVRMH-----------QVDDEVRIE--IGDNGNGVA--FPERIFEPFFTTKENGM 1187
            +  +  +R+            Q D    +E  + D G G++    ER+F PFFTT+ +GM
Sbjct: 587  NVGSRVLRLRVARAAAVGGTVQEDGRRWLEFSVADLGCGISDEVAERLFTPFFTTRADGM 646

Query: 1188 GMGLAISRSIVEAHGGRLWAEKNEPRGARFVFTLP 1222
            G+GL++ R++VE HGG L  E N+PRG  F FTLP
Sbjct: 647  GLGLSLCRTVVEQHGGALVFEPNKPRGTVFRFTLP 681



 Score = 31.6 bits (70), Expect = 2e-04
 Identities = 64/345 (18%), Positives = 126/345 (36%), Gaps = 42/345 (12%)

Query: 286 IVAAISRQYQLALSNLQQSVATLRERERELSQIV-------NMVPVHIRRLTPEGEPTFF 338
           +V AIS      L  L +        ER+L+  +       + V   +R    +G  T+ 
Sbjct: 273 LVTAISIALVSVLVLLARDTRRRLRAERDLADALAFRKAMEDSVITGLRARDLQGRITYV 332

Query: 339 NKRLTDFFGLDLQQLEKPNASRLVTAVQTLVHPDD-ADSLLQAVRRSLATGEPYSIKYR- 396
           N    +  G   ++L   NA     A      P + A    Q   R LA G P    +  
Sbjct: 333 NPAFCEMVGFSPEELMAGNAE----APDAPYWPTELAHEYQQRQARRLAGGMPPREGFES 388

Query: 397 -MRRADGAYRWVDGRAEPLRDDSGTILQWFAISIDIDDEVRMQEALKQSERRYRELFHYM 455
              R DG    V     PL +       W +  ID+ ++ R++E  + S+ R +      
Sbjct: 389 VFMRKDGTRFPVLIFEAPLINAHKVQTGWMSAFIDVSEQRRIEELSRASQERLQASARLA 448

Query: 456 PIGLAQIDAGKLIPMFKEMRAQGVVSLETYMDENPEFLSHALEALEVEEVNQHVIDMFRA 515
            +G       ++  +      Q + ++ +Y   +   L          +  +  + + R 
Sbjct: 449 TVG-------EMASLLSHELTQPLAAIASYASGSLNLLGPHARG----DQGEVAMAVRRI 497

Query: 516 NSREEMGGSITRYWQPALATIRRSIEARYRGEEVFQEETRV----------ARMDGSVMD 565
             + +  G + R       ++   +  R R  E    +  +          AR  G +++
Sbjct: 498 AEQADRAGQVIR-------SVHDFVRRRDRTREPVAPQALIDAVLPLVRLQARKLGVIIE 550

Query: 566 VVFAIAQPGAIADKSLVGFIDITERKRAEEALRAREREFSQLVNM 610
           VVF    P A+ D++LV  + +   + A +A+ + +   S+++ +
Sbjct: 551 VVFEDRLPAAMCDRTLVEQVLLNLARNAMQAMDSPDNVGSRVLRL 595



 Score = 30.4 bits (67), Expect = 5e-04
 Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 14/120 (11%)

Query: 755 GELTYVSKRYQDQAGAPGAEIKDFDALAREVAHPDDFPTMFA-----RATQGFATGQP-- 807
           G +TYV+  + +  G    E+   +A A +  +   +PT  A     R  +  A G P  
Sbjct: 327 GRITYVNPAFCEMVGFSPEELMAGNAEAPDAPY---WPTELAHEYQQRQARRLAGGMPPR 383

Query: 808 --FVNRFRRRLKDGNYRWIEARAQPLRRADGPIVQWYFASIDIEEEMRAQEALRERERFL 865
             F + F R  KDG    +     PL  A      W  A ID+ E+ R +E  R  +  L
Sbjct: 384 EGFESVFMR--KDGTRFPVLIFEAPLINAHKVQTGWMSAFIDVSEQRRIEELSRASQERL 441