Pairwise Alignments

Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021

Subject, 655 a.a., PAS domain-containing sensor histidine kinase from Magnetospirillum magneticum AMB-1

 Score =  172 bits (435), Expect = 1e-46
 Identities = 122/390 (31%), Positives = 190/390 (48%), Gaps = 22/390 (5%)

Query: 848  IEEEMRAQEALRERERFLWQLVETLPAMIDCAAPNGEPVYRSQQLRDFLGYELEELDGGA 907
            +   + A++ALR    F   + ++L   +      G   Y +      +G+  +EL G  
Sbjct: 275  VRRRLAAEQALRTEHSFRKAMEDSLTVGMRARDLEGRITYVNPAFCHMVGWTADELVGTV 334

Query: 908  KSRLDATLDAGVHPDDLAGVKEQYARSLESGEPYRRKHRL--RRFDGEYRWIETRAAPMR 965
               L         P+DL    E + R++  GE       L  RR +GE        AP+ 
Sbjct: 335  PPMLYWV------PEDLEHTYELH-RAVMRGEAPAEGFELVFRRKNGERFSALIYEAPLI 387

Query: 966  DEKGAIVQWNVICLDVDREVRMQEELRLAQERLARAGQAASLAELSASIAHEVNQPLAAI 1025
            D  G    W    LD+    R +E  R  QE+L    +  ++ E+++++AHE+NQPL+AI
Sbjct: 388  DSDGRHTGWMASVLDITERKRAEELSRQHQEKLQHTARLITMGEMASTLAHELNQPLSAI 447

Query: 1026 VANSHACYRWLSADPVNIERAKITTERVIRDAKSAADVVSRIRALFKQSVENRGILVLSD 1085
             + +  C   LSA     E       ++   A+ A  ++ RI    ++S       +L +
Sbjct: 448  ASYATGCLNRLSAGDARPEELVPPLTKLGAQAQRAGQIIRRIHDFVRKSEPLVVPCLLDE 507

Query: 1086 VISEACSLVAAEALRRRIRLNIDVETNLAP------VTVDRIQVQQVLVNLIRNGMEAMD 1139
            +I      +  +A +R IR+++D+  +L P      V  D I ++QV++NL+RN MEAM 
Sbjct: 508  IIEGVVGFLEPDARKRGIRIDLDL--SLTPGAARPRVEADHILIEQVILNLVRNAMEAMG 565

Query: 1140 AVD-DNKTVDVRMHQVDDEVRIEIGDNGNGVAFPE---RIFEPFFTTKENGMGMGLAISR 1195
                  + + + +   D + RI + D G G+  PE    +F PFFTTKE GMGMGL I R
Sbjct: 566  HTPRPQRRLTISLQCADGQARIRVADRGTGIP-PEIAANLFSPFFTTKETGMGMGLNICR 624

Query: 1196 SIVEAHGGRLWAEKNEPRGARFVFTLPNVA 1225
            SIVEAH G LW E+N   G+ F+FTLP +A
Sbjct: 625  SIVEAHRGHLWFEENPGGGSVFLFTLPEMA 654



 Score = 32.3 bits (72), Expect = 1e-04
 Identities = 30/135 (22%), Positives = 51/135 (37%), Gaps = 5/135 (3%)

Query: 324 VHIRRLTPEGEPTFFNKRLTDFFGLDLQQLEKPNASRLVTAVQTLVHPDDADSLLQAVRR 383
           V +R    EG  T+ N       G    +L       L    + L H  +   L +AV R
Sbjct: 301 VGMRARDLEGRITYVNPAFCHMVGWTADELVGTVPPMLYWVPEDLEHTYE---LHRAVMR 357

Query: 384 SLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAISIDIDDEVRMQEALKQ 443
             A  E + + +R +  +     +     PL D  G    W A  +DI +  R +E  +Q
Sbjct: 358 GEAPAEGFELVFRRKNGERFSALI--YEAPLIDSDGRHTGWMASVLDITERKRAEELSRQ 415

Query: 444 SERRYRELFHYMPIG 458
            + + +     + +G
Sbjct: 416 HQEKLQHTARLITMG 430



 Score = 29.3 bits (64), Expect = 0.001
 Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 4/141 (2%)

Query: 727 EEALRNSKQQLEQMIEAVPFSTLSFAPTGELTYVSKRYQDQAGAPGAE-IKDFDALAREV 785
           E+ALR      + M +++     +    G +TYV+  +    G    E +     +   V
Sbjct: 282 EQALRTEHSFRKAMEDSLTVGMRARDLEGRITYVNPAFCHMVGWTADELVGTVPPMLYWV 341

Query: 786 AHPDDFPTMFARAT-QGFATGQPFVNRFRRRLKDGNYRWIEARAQPLRRADGPIVQWYFA 844
               +      RA  +G A  + F   FRR  K+G          PL  +DG    W  +
Sbjct: 342 PEDLEHTYELHRAVMRGEAPAEGFELVFRR--KNGERFSALIYEAPLIDSDGRHTGWMAS 399

Query: 845 SIDIEEEMRAQEALRERERFL 865
            +DI E  RA+E  R+ +  L
Sbjct: 400 VLDITERKRAEELSRQHQEKL 420