Pairwise Alignments
Query, 1229 a.a., two-component sensor histidine kinase from Sinorhizobium meliloti 1021
Subject, 991 a.a., two component sensor kinase/response regulator hybrid from Agrobacterium fabrum C58
Score = 117 bits (294), Expect = 4e-30
Identities = 140/545 (25%), Positives = 218/545 (40%), Gaps = 106/545 (19%)
Query: 722 DIMHVEEALRNSKQQLEQMIEAVPFST--------LSFAPTGELTYVSKRYQDQAGAPGA 773
D + EAL S+ +L ++ A+P FA G L + +R ++ G
Sbjct: 157 DKVRALEALEQSRMELSRLTNALPILVGYVDRDYVYRFANDGYLEWFGRRAEEVIG---- 212
Query: 774 EIKDFDALAREVAHPDDFPTMFARATQGFA----TGQPFVNRFRRRLKDGNYRWIEARAQ 829
R V PD F A + + G+ V+ R DG+ R E
Sbjct: 213 ---------RSV--PDIVGAAFFEARRTYLDRALAGEKIVSDTVIRRPDGSLRAAEISYV 261
Query: 830 PLRRADGPIVQWYFASIDIEEEMRA-QEALRERERFLWQLVETLPAMIDCAAPNGEPVYR 888
P +DG I Y IDIEE R+ QE L RF VE + ++ + +G
Sbjct: 262 PRYISDGSIDGIYVLIIDIEERKRSEQEILISNNRFR-AAVEAVHGVLWTNSADGRMRGE 320
Query: 889 SQQLRDFLGYELEELDGGAKSRLDATLDAGVHPDDLAGVKEQYARSLESGEPYRRKHRLR 948
G EE D VHP+D G + + R++ Y +HR+R
Sbjct: 321 QPAWTAMTGQTPEEYQ-------DFGWADAVHPEDRQGSVDSWNRAVAEKSTYLWEHRVR 373
Query: 949 RFDGEYRWIETRAAPMRDEKGAIVQWNVICLDVDRE---------------------VRM 987
R DG YR R P+ D+ GAI +W + D+ + +R
Sbjct: 374 RHDGVYRTFSIRGVPIFDKDGAIAEWVGVHTDITEQRQSEDTLKEHASNLEREIRHRIRA 433
Query: 988 QEELR-------------LAQER-----LARAGQAASLAELSASIAHEVNQPLAAIVANS 1029
+E+LR +A+ R L +A + S+ +L+ +AH+ N L I N
Sbjct: 434 EEQLRQLNEGLEARVEMEMAERRQTEKALQQAQKMESIGQLTGGVAHDFNNLLQVIAGN- 492
Query: 1030 HACYRWLSADPVNIERAKITTERVIRDAKSAADVVSRIRAL-FKQSVENRGILVLSDVIS 1088
+ LS D + ERA+ E + A + S++ A +Q++E R I + V
Sbjct: 493 ---LQLLSKDVIGNERAERRLENALAGVHRGAKLASQLLAFGRRQALEPRVINIARFVTG 549
Query: 1089 EACSLVAAEALRRRIRLNIDVET----NLAPVTVDRIQVQQVLVNLIRNGMEAMDAVDDN 1144
+ LRR + I+VE L D QV+ L+NL N +AM+
Sbjct: 550 ------MDDLLRRSLGEGIEVEVITSGGLWNTYADPNQVENALLNLAINARDAMEG-HGK 602
Query: 1145 KTVDVRMHQVDDE-------------VRIEIGDNGNGVA--FPERIFEPFFTTKENGMGM 1189
T++V +D + V + + D G+G++ E++FEPFF+TK G G
Sbjct: 603 LTIEVGNAVLDRDYARKHSEVSAGQYVMLAVTDTGSGMSPEILEKVFEPFFSTKPEGKGT 662
Query: 1190 GLAIS 1194
GL +S
Sbjct: 663 GLGLS 667
Score = 94.4 bits (233), Expect = 4e-23
Identities = 87/349 (24%), Positives = 143/349 (40%), Gaps = 22/349 (6%)
Query: 521 MGGSITRYWQPALATIRRSIEARYRGEEV-FQEETRVARMDGSVMDVVF-----AIAQPG 574
+GG++ W R +EA +RGE + ++++ G +V+F I G
Sbjct: 83 LGGTVPGIWPEIWDWNSRILEAGFRGEVMAYRDQPMTLMRHGVPEEVIFDLFYTPIYNEG 142
Query: 575 AIADKSLVGFIDITERKRAEEALRAREREFSQLVNMVPSYLWRLTPDGVPNFLNQRLIDF 634
D L ++ T++ RA EAL E S+L N +P + + D V F N +++
Sbjct: 143 GTVDGVLCTVLENTDKVRALEALEQSRMELSRLTNALPILVGYVDRDYVYRFANDGYLEW 202
Query: 635 LG---PDVVNANVEGVHPLAAIIGAVVHPDDKTRMSNALFHSVATGERFSMKYRLRRADG 691
G +V+ +V I+GA +T + AL GE+ +RR DG
Sbjct: 203 FGRRAEEVIGRSVPD------IVGAAFFEARRTYLDRAL-----AGEKIVSDTVIRRPDG 251
Query: 692 VYRWVEGSAEPMRDEEGRILQWYGLSHDIDDIMHVEEALRNSKQQLEQMIEAVPFSTLSF 751
R E S P +G I Y L DI++ E+ + S + +EAV +
Sbjct: 252 SLRAAEISYVPRYISDGSIDGIYVLIIDIEERKRSEQEILISNNRFRAAVEAVHGVLWTN 311
Query: 752 APTGELTYVSKRYQDQAGAPGAEIKDFDALAREVAHPDDFPTMFARATQGFATGQPFVNR 811
+ G + + G E +DF + HP+D + A ++
Sbjct: 312 SADGRMRGEQPAWTAMTGQTPEEYQDFG--WADAVHPEDRQGSVDSWNRAVAEKSTYLWE 369
Query: 812 FRRRLKDGNYRWIEARAQPLRRADGPIVQWYFASIDIEEEMRAQEALRE 860
R R DG YR R P+ DG I +W DI E+ ++++ L+E
Sbjct: 370 HRVRRHDGVYRTFSIRGVPIFDKDGAIAEWVGVHTDITEQRQSEDTLKE 418
Score = 80.9 bits (198), Expect = 5e-19
Identities = 79/333 (23%), Positives = 126/333 (37%), Gaps = 46/333 (13%)
Query: 413 PLRDDSGTILQWFAISIDIDDEVRMQEALKQSERRYRELFHYMPIGLAQIDAGKLIPMFK 472
P+ ++ GT+ ++ D+VR EAL+QS L + +PI + +D +
Sbjct: 137 PIYNEGGTVDGVLCTVLENTDKVRALEALEQSRMELSRLTNALPILVGYVDRDYVYRF-- 194
Query: 473 EMRAQGVVSLETYMDENPEFLSHALEALEVEEVNQHVIDMFRANSREEMGGSITRYWQPA 532
N ++ F + E +G S+ A
Sbjct: 195 --------------------------------ANDGYLEWFGRRAEEVIGRSVPDIVGAA 222
Query: 533 LATIRRSIEARYRGEEVFQEETRVARMDGSVMDVVFAIAQPGAIADKSLVGF----IDIT 588
RR+ R E +T + R DGS+ + P I+D S+ G IDI
Sbjct: 223 FFEARRTYLDRALAGEKIVSDTVIRRPDGSLRAAEISYV-PRYISDGSIDGIYVLIIDIE 281
Query: 589 ERKRAEEALRAREREFSQLVNMVPSYLWRLTPDGVPNFLNQRLIDFLGPDVVNANVEGVH 648
ERKR+E+ + F V V LW + DG G G
Sbjct: 282 ERKRSEQEILISNNRFRAAVEAVHGVLWTNSADGRMRGEQPAWTAMTGQTPEEYQDFG-- 339
Query: 649 PLAAIIGAVVHPDDKTRMSNALFHSVATGERFSMKYRLRRADGVYRWVEGSAEPMRDEEG 708
VHP+D+ ++ +VA + ++R+RR DGVYR P+ D++G
Sbjct: 340 -----WADAVHPEDRQGSVDSWNRAVAEKSTYLWEHRVRRHDGVYRTFSIRGVPIFDKDG 394
Query: 709 RILQWYGLSHDIDDIMHVEEALRNSKQQLEQMI 741
I +W G+ DI + E+ L+ LE+ I
Sbjct: 395 AIAEWVGVHTDITEQRQSEDTLKEHASNLEREI 427
Score = 54.3 bits (129), Expect = 5e-11
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 369 VHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGTILQWFAIS 428
VHP+D + + R++A Y ++R+RR DG YR R P+ D G I +W +
Sbjct: 344 VHPEDRQGSVDSWNRAVAEKSTYLWEHRVRRHDGVYRTFSIRGVPIFDKDGAIAEWVGVH 403
Query: 429 IDIDDEVRMQEALKQ-SERRYRELFH 453
DI ++ + ++ LK+ + RE+ H
Sbjct: 404 TDITEQRQSEDTLKEHASNLEREIRH 429
Score = 35.0 bits (79), Expect = 3e-05
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 8/147 (5%)
Query: 303 QSVATLRERERELSQIVNMVPVHIRRLTPEGEPTFFNKRLTDFFGLDLQQLEKPNASRLV 362
+++ L + ELS++ N +P+ + + + F N ++FG +++ +
Sbjct: 160 RALEALEQSRMELSRLTNALPILVGYVDRDYVYRFANDGYLEWFGRRAEEV-------IG 212
Query: 363 TAVQTLVHPDDADSLLQAVRRSLATGEPYSIKYRMRRADGAYRWVDGRAEPLRDDSGTIL 422
+V +V ++ + R+LA GE +RR DG+ R + P G+I
Sbjct: 213 RSVPDIVGAAFFEARRTYLDRALA-GEKIVSDTVIRRPDGSLRAAEISYVPRYISDGSID 271
Query: 423 QWFAISIDIDDEVRMQEALKQSERRYR 449
+ + IDI++ R ++ + S R+R
Sbjct: 272 GIYVLIIDIEERKRSEQEILISNNRFR 298