Pairwise Alignments

Query, 343 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 481 a.a., mechanosensitive ion channel protein MscS from Pseudomonas simiae WCS417

 Score =  162 bits (409), Expect = 2e-44
 Identities = 107/330 (32%), Positives = 171/330 (51%), Gaps = 15/330 (4%)

Query: 9   PLVLVNVLGVAGIVVWHIQGGTRPTGRLIAQILFFSVMSVVLYLGG-----IAPYRPDGV 63
           P++    L    I VW +        +L A++  F+V S VL+  G     +APY  D  
Sbjct: 9   PMLCALALIFIDIAVWRLISVNLANWKLAARLAIFAVYSAVLFNDGMNPMQVAPYA-DNT 67

Query: 64  QLQGIGALLSKSARILWWAHLAWAVIGFIQIYVRLNRRPREAHLIQDMAIAAIYLGVALS 123
            L     L + + +I WW   A  +   +   V + R      L+QD+  A I+L   ++
Sbjct: 68  ALH----LSATALQIGWWLFAARTLTVLLGA-VMMQRVGHTGRLLQDLVGAVIFLIAIIA 122

Query: 124 VVGFVFGMPVGTLVTTSGVIAVIFGLALQNTLGDVFSGIALTLGRAYAIGDWIELTDGTE 183
            + +V  +PV  ++ TSG +A+I GLALQ+TL DVFSGI L   + Y I DWI + DGTE
Sbjct: 123 AMAYVLDLPVKGVLATSGAVAIIVGLALQSTLSDVFSGIVLNTTKPYQIDDWISI-DGTE 181

Query: 184 GRVIETNWRSTNLLSATHNVVVLPNSVLAKQGMTNLSRPDETHLITLRVRVAATQRPRVV 243
           GRV + +WR+T L ++  ++ V+PNS+ AK  + N SRP +   +++ ++V+   RP+ V
Sbjct: 182 GRVTDIDWRATRLQTSQGSLAVIPNSLAAKAKIINFSRPADMFGLSVSLQVSPHARPQTV 241

Query: 244 EEIMRSALQSSVLINKSPPPVAALKAIDAIAIEVELQFRVDNVAIRTPAKNEIVDLLHDR 303
            E +  A+Q    +  +P P  A KA  +  +E E+   V  ++++   +N++ DL    
Sbjct: 242 IEALERAMQGCRPLLGNPAPSVAFKASASGGVEYEISGFVPAMSLKREVRNQLYDLAFRH 301

Query: 304 CEANGLSLAIPAESLAFMPPPTDSQYLATL 333
            +A G+ L    ES     PP  S   A L
Sbjct: 302 LQAAGVGLLSATES---STPPAMSAARALL 328