Pairwise Alignments

Query, 410 a.a., membrane protein from Sinorhizobium meliloti 1021

Subject, 407 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  372 bits (955), Expect = e-107
 Identities = 182/401 (45%), Positives = 254/401 (63%), Gaps = 6/401 (1%)

Query: 6   IAWEWLAFAVRWLHVVTAIAWIGSSFYFIALDLGLVKRDHLPPGAYGEEWQVHGGGFYHI 65
           I  E+ +  +RW H++  +AWIGSSFYF+ LD  L     +PPG  GE W+VHGGGFY +
Sbjct: 4   ILHEYGSLLLRWTHIIAGMAWIGSSFYFMHLDASLKACADIPPGKGGEAWEVHGGGFYQV 63

Query: 66  HKYLVAPAAMPEHLTWFKWESYATWLSGFAMLCIVYYGGADLFLIDRHVLDISATTAILI 125
            KYLVAP  +PE L W KW+SYATW++GF +L  VYY  + +FLID  V+++   TA++I
Sbjct: 64  KKYLVAPDFLPEELGWHKWQSYATWITGFFLLIWVYYYQSSIFLIDPAVMNLKPITALVI 123

Query: 126 SLASLGLGWVLYDLLCKSPIGKSTWGLMALLYLVLVAMAWGYTQVFTGRAAFLHLGAFTA 185
            L  L  GW+ YD LC+S +G     +  +++  +V  A+ Y QVF+ RAAF+H GA  A
Sbjct: 124 GLGGLAAGWIAYDQLCRSKLGDKPLVVGIIVFAGVVLAAFLYQQVFSPRAAFIHTGALMA 183

Query: 186 TIMSANVFLIIIPNQKIVVADLIAGRMPDPRLGAQAKQRSLHNNYLTLPVIFFMLSNHYP 245
           TIMS NVF +IIPNQ  VVA L AG +P+P  G  AK RS HNNY TLPV+F M+SNHYP
Sbjct: 184 TIMSGNVFFVIIPNQHKVVAALKAGEVPNPYYGKTAKLRSGHNNYFTLPVVFLMISNHYP 243

Query: 246 LAFATAFNWIIAALVFLMGVTIRHWFNTTHARKGRPTWTWLVTTLLFILIMWLST----A 301
           L ++T + ++I AL  + G  IR+++N  HA +G   W WLV  +  IL +++S     A
Sbjct: 244 LTYSTPYAFVIVALALVAGTVIRYFYNERHAGRGDKAWCWLVAAVCLILAIFISATTTPA 303

Query: 302 PKILTGEERADTAPAFRRFAENAHFPA-IKETISTRCSMCHAAEPAYEGIVRAPNGVTLE 360
            ++  G      +PAF +       P  I+  +  RC+MCHAAEP YEG    P G+ L+
Sbjct: 304 GRMALGLPPL-VSPAFAKSGPAVDVPVDIQNVVMGRCAMCHAAEPVYEGFAVPPRGILLD 362

Query: 361 SDAEIAARAREIYIQAGRSHAMPPGNISDMTAEERRLVTAW 401
           +   IA   + I +QAG +HAMPP NI++++ E+R ++  W
Sbjct: 363 TPEAIAKNRKLILVQAGLTHAMPPNNITELSDEDRAMLKEW 403