Pairwise Alignments

Query, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 629 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  115 bits (288), Expect = 3e-30
 Identities = 90/317 (28%), Positives = 154/317 (48%), Gaps = 19/317 (5%)

Query: 23  AGLAVILV-LAGIGYLLFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGA 81
           AG+A+++V +A + + L    L +   I    L   SL  +    G+A+ GHAA FG GA
Sbjct: 312 AGVALVVVAVAALPFFLGNYALTVGAEILIYVLFAASLHFMMTVGGLASFGHAAYFGLGA 371

Query: 82  YAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVI----LRAHGLPQLVLSIALIHLF 137
           Y A     + G       + A ++ G L GLA  V+     +R  G+   +L++A   + 
Sbjct: 372 YGAAFLVKYMGAP-----MEAALIVGPLLGLAGAVLFGWFCVRLSGVYFAMLTLAFAQIA 426

Query: 138 HEFANKASSWTGGSDGLAGISPDPLIGLFAFDLWGRTAYVFGVVLLAIVFVLLRLVVRSP 197
              A +    TGG +GL GI P       A   W       G+ ++ +   +LR++V SP
Sbjct: 427 WSIAFQWVDVTGGDNGLLGIWPASWASRPAGFFW----LALGIAVVGVA--VLRMLVFSP 480

Query: 198 FGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTL 257
           FG   R +R+   R  A+G +        ++++G  AG+ GAL A     V  D ++   
Sbjct: 481 FGYGLRAVRDSALRSEAIGLNRQRMQWAAFIVAGTFAGLAGALFAFLKGSVFPDYMAIPT 540

Query: 258 SAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTMVGALLIAVVLFAPKGL 317
           S + LVM++LGG  ++ GA+ G +++      + +      L ++G +++ +VL  PKG+
Sbjct: 541 SVDGLVMVLLGGVETVSGAVVGAVLYKALAIWLMSQTDLSKL-VLGGVIVVIVLAFPKGV 599

Query: 318 YGTVAEVLAR--RRGAG 332
            G + ++  R  R+G G
Sbjct: 600 VGFIEDLRHRWPRKGNG 616



 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 71/288 (24%), Positives = 123/288 (42%), Gaps = 21/288 (7%)

Query: 43  LALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGAYAAGIAAVHFGITDPL----L 98
           L+ L    ++ L+   L ++ G   +    H A +  GAY A      F    PL     
Sbjct: 9   LSGLASAASLFLVASGLSIIFGVTRIVNFAHGAFYMLGAYVAYTLTTRFA--GPLGFWGA 66

Query: 99  MLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFANKASSWTGGSDGLAGIS 158
           ++AA I+   L  L   V++ R +  P+L   +A   +     +      G  D L   +
Sbjct: 67  IVAAAIIVAILGALMEMVLLRRIYQAPELFQLLATFGVTLMVQDLVVVIWGPEDLLGPRA 126

Query: 159 PD--PLIGLFA-----FDLWGRTAYVFGVVLLAIVFVLLRLVVRSPFGMLCRGIREDPTR 211
           P     I LF      +DL+  T    G V+L I+++L     ++ +G+L R   +D   
Sbjct: 127 PGFTGAISLFGRMVPTYDLFMMT---LGPVVLGILWLLFH---KTRWGVLVRAATQDREM 180

Query: 212 IRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLSAESLVMLVLGGTG 271
           + A+G +       ++ +   +A +GGAL    T V    ++  ++  E  V++V+GG G
Sbjct: 181 VAALGVNQKWLFTGVFALGVFLAALGGALQIPRTTVT--HAMDLSIIVEVFVVVVIGGLG 238

Query: 272 SLFGALTGTIVFMFFEDLVSTANPFHWLTMVGALLIAVVLFAPKGLYG 319
           S+FGA    I+            P   L  V  ++  V++  P GL+G
Sbjct: 239 SVFGAFVAAIIVAELNAFGILILPQISLITVFLVMAVVLVVRPWGLFG 286