Pairwise Alignments

Query, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 305 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  129 bits (325), Expect = 7e-35
 Identities = 97/315 (30%), Positives = 150/315 (47%), Gaps = 15/315 (4%)

Query: 18  LGRDLAGLAVILVLAGIGYLLFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALF 77
           + R +    +   LA +        L L+ R    AL   SL  + G  G+ + GHAA  
Sbjct: 1   MNRLILAFVLFAALAAVPAFADTAMLTLVARAMIFALAATSLGFILGQGGLVSFGHAATM 60

Query: 78  GSGAYAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLF 137
           G GAYA GI  +  G+ D L+     +    L  L  G + LR  G+  +++++A   + 
Sbjct: 61  GIGAYAVGIL-MEEGVRDALVSFPVAMAAAGLFALVTGAISLRTRGVYFIMITLAFGQMA 119

Query: 138 HEFANKASSWTGGSDGLAGISPDPLIGLFAFDLWGRTAYVFGVV---LLAIVFVLLRLVV 194
             F  ++ S  GG DGL+  +   + G      W +    F  V   LLA   ++  ++ 
Sbjct: 120 F-FVTQSLSAYGGDDGLSLAARSTVAGA----RWLKDPKTFHYVVLGLLACTVLVSTVLA 174

Query: 195 RSPFGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLS 254
           R+PFG +    R++  R+RA+G  P    L  YVI+GA AG+ GAL A  T+ V    LS
Sbjct: 175 RAPFGRVLAAGRDNERRLRALGVDPYAYRLVAYVIAGAFAGLAGALYANLTEFVSPAYLS 234

Query: 255 FTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTMVGALLIAVVLFAP 314
           +  SAE +VM+V GG  +  G + G +  +  ED ++     HW  + G LL+ +VL   
Sbjct: 235 WHRSAEFIVMVVAGGPATALGPVLGALGVVLLEDGLAHLTE-HWRIIFGPLLVLLVL--- 290

Query: 315 KGLYGTVAEVLARRR 329
               G +A +L  RR
Sbjct: 291 --ARGGIATLLGGRR 303