Pairwise Alignments

Query, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 322 a.a., Phenylacetate ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  109 bits (272), Expect = 1e-28
 Identities = 87/320 (27%), Positives = 152/320 (47%), Gaps = 15/320 (4%)

Query: 16  RGLGRDLAGLAVILVLAGIGYLL---FPNN--LALLTRITAIALLVLSLDLVTGYCGVAT 70
           RG+ R    LA +L+LA +  LL   F  N  L ++  +   +L  + L+L+ GY G  +
Sbjct: 4   RGVARPRP-LASLLLLAAVIVLLPFVFTANFHLRVIVLVWIYSLAAIGLNLMMGYGGQVS 62

Query: 71  LGHAALFGSGAYAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLS 130
           LGH A    GAYA  + +  +G++ P + L  G+L  A      G  ILR  G    V +
Sbjct: 63  LGHGAFLAIGAYAVAVGSSRWGLS-PAVTLPGGVLVSAALAFVVGRPILRLKGHYLAVGT 121

Query: 131 IALIHLFHEFANKASSWTGGSDGLAGISPDPLIGLFAFDLWGRTAY--VFGVVLLAIVFV 188
           +    L         +W+GG DG+  +       LF +D+ G   +  + G +L+   ++
Sbjct: 122 LGFGVLVFMALTNQVAWSGGPDGMQVVRR----ALFGWDMRGNIFWYALTGSLLMIGAWI 177

Query: 189 LLRLVVRSPFGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVV 248
            L L   SP G+  R +R+      ++G       L ++V+S   A V G+L A+    V
Sbjct: 178 ALNLA-NSPTGLALRALRDSEIASSSLGVDIARQKLFVFVLSACYASVAGSLIALFNGHV 236

Query: 249 GLDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTMVGALLIA 308
                 F +S + + M+VLGG GS+ G++ G  + +    ++S+ + +     +G +++A
Sbjct: 237 TPGLSDFMVSVQLVTMVVLGGMGSVLGSVVGAALLVLLPQVLSSLHDYE-QAFIGFVMVA 295

Query: 309 VVLFAPKGLYGTVAEVLARR 328
             +F   G+  ++A  L  R
Sbjct: 296 SAIFLRAGIVPSLARALQSR 315