Pairwise Alignments

Query, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 643 a.a., ABC transporter, permease protein 1 (cluster 4, leucine/isoleucine/valine/benzoate) / ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  139 bits (349), Expect = 3e-37
 Identities = 97/311 (31%), Positives = 156/311 (50%), Gaps = 12/311 (3%)

Query: 22  LAGLAVILVLAGIGYLLF--PNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGS 79
           +A   + L+LA +  L    P  + L+  +   AL   SL  + G  G+ + GHAA FG 
Sbjct: 324 IAAAVLALMLAALPLLTVNSPYTMVLMIDLLIAALFATSLHFIMGPAGMHSFGHAAYFGL 383

Query: 80  GAYAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHE 139
           GAY A +      +   + +L A ++  AL  L  G   +R  G+   +L++A   +   
Sbjct: 384 GAYGAALLVRSLHLPMEVALLVAPVVA-ALGALVYGWFAVRLSGVYLAMLTLAFAQITWA 442

Query: 140 FANKASSWTGGSDGLAGISPDPLIGLFAFDLWGRTAYVF-GVVLLAIVFVLLRLVVRSPF 198
              +  S+TGGS+GL G+ P   +         + AY +  +VL+      LR V+ SPF
Sbjct: 443 ITYQWDSFTGGSNGLTGVWPSEWLS-------NKQAYYWLTLVLVGAGVWWLRRVLFSPF 495

Query: 199 GMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLS 258
           G   R  R+   R  A+G          +VI+G VAG+ GAL A S   +  +SLS   S
Sbjct: 496 GYALRAGRDSVLRADAIGIDVKRMQWAAFVIAGTVAGLAGALYAFSKGSISPESLSVGKS 555

Query: 259 AESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTMVGALLIAVVLFAPKGLY 318
            + LVM++LGG  +L G + G + F +  D V+  N  +W  M+GA+++ +VL  P+G+ 
Sbjct: 556 VDGLVMVLLGGIQTLAGPVVGAVTFTWLHDTVA-RNTDYWRAMLGAIILILVLLFPQGIA 614

Query: 319 GTVAEVLARRR 329
           G++ ++  R R
Sbjct: 615 GSIKQLAERWR 625



 Score = 69.3 bits (168), Expect = 2e-16
 Identities = 80/297 (26%), Positives = 134/297 (45%), Gaps = 34/297 (11%)

Query: 46  LTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGAYAAGIAAVHFGITD---PLLMLAA 102
           L   +++  +   L L+ G   +    H + F  G Y A       G +    P L++AA
Sbjct: 14  LAGASSLFFVAAGLSLIFGVTRIVNFAHGSFFMVGIYVAYTLVDKLGSSLGFWPALLIAA 73

Query: 103 GILG--GALAGLACGVVILRAHGLPQLVLSIALIHLFHEFANKASSWTGGSDGLAGISPD 160
             +G  GAL  +     I +A  L QL+ + AL+ +  +    A  W  G D L G    
Sbjct: 74  VAVGVLGALIEVVLLRRIYKAPELFQLLATFALVLVIKD----AVLWLWGPDELLGPRAP 129

Query: 161 PLIGLFAFDLWGRT-------AYVFGVVLLAIVFVLLRLVVRSPFGMLCRGIREDPTRIR 213
            L G  + ++ GR          V G ++L +V++LL    R+ FG L R   +D   + 
Sbjct: 130 GLKG--SVEILGRQFPSYDLFLIVVGPLVLGLVWLLL---TRTRFGTLVRAATQDREMVS 184

Query: 214 AMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLSAESLVMLVLGGTGSL 273
           A+G +       ++ +   +AG+GGAL  +  +   L+    T+ A + V++V+GG GSL
Sbjct: 185 ALGVNQAWLFTAVFALGALLAGLGGALQ-LPREPATLEMDLNTIGA-AFVVVVVGGMGSL 242

Query: 274 FGALTGTI---------VFMFFEDLVSTANPFHWLT-MVGALLIAVVL-FAPKGLYG 319
            GA    +         +++    +      F  LT MV  L++A+VL + P GL+G
Sbjct: 243 PGAYVAALLIAEIKAVCIWLGVVQIFGIDVSFSKLTLMVDFLVMAIVLVWRPWGLFG 299