Pairwise Alignments

Query, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 355 a.a., ABC transporter, permease protein 2 (cluster 4, leucine/isoleucine/valine/benzoate) from Variovorax sp. SCN45

 Score =  134 bits (337), Expect = 3e-36
 Identities = 103/341 (30%), Positives = 163/341 (47%), Gaps = 33/341 (9%)

Query: 20  RDLAGLAVILVLA-GIGYLLFPN--NLALLTRITAIALLVLSLDLVTGYCGVATLGHAAL 76
           R LA L V+L LA      +FP    L++  +I    +LV S DL+ GY G+ +  H   
Sbjct: 15  RLLALLLVVLFLALAFAPFIFPGVKALSVAAKILVFVVLVASFDLLLGYTGIVSFAHTMF 74

Query: 77  FGSGAYAAGIAAVHFGIT--DPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALI 134
           FG GAY   I+A   G      L+ L A +    +   A G+  LR   +   ++++A+ 
Sbjct: 75  FGIGAYGIAISASRLGPNWGAVLVGLGASLAISLVLSFAIGLFSLRVRAIFFAMITLAVA 134

Query: 135 HLFHEFANKASSWTGGSDGLAGISPDPLIGLFAF--------DLWGRTAYVFGVVLLAIV 186
             F   A++ S +TGG DGL    P+ +   F F         L GR    + + + A+V
Sbjct: 135 SAFQTLASQLSDFTGGEDGLTFKLPELISPSFEFSEEPFLGVSLDGRLLCYYLLFVAAVV 194

Query: 187 FVLLRL-VVRSPFGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVST 245
            VL  L +V SPFG + + IRE+  R  A+G    +      V+S   A + GA+ A+  
Sbjct: 195 LVLALLRIVNSPFGRVLQAIRENEFRAEAIGYRVVVYRTTAAVLSALFATLAGAMLAIWL 254

Query: 246 QVVGLD-SLSFTLSAESLVMLVLGGTGSLFGALTGTIVFM----FFEDLVSTAN------ 294
           +  G D SLSF +  + L+++V+GG G+++GA  G ++F+    + +DL+   N      
Sbjct: 255 RYNGPDTSLSFEIMIDVLLIVVIGGMGTIYGAAIGAVLFVIAQSYLQDLLRIGNEAASGL 314

Query: 295 --------PFHWLTMVGALLIAVVLFAPKGLYGTVAEVLAR 327
                   P  WL  +G L +  V + P G+ G +    AR
Sbjct: 315 PWLAALLSPDRWLLWLGVLFVLSVYYFPTGIVGKLRARAAR 355