Pairwise Alignments

Query, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 330 a.a., Broad-specificity amino acid ABC transporter, permease protein 2 from Variovorax sp. SCN45

 Score =  142 bits (359), Expect = 9e-39
 Identities = 99/320 (30%), Positives = 163/320 (50%), Gaps = 22/320 (6%)

Query: 28  ILVLAGIGYLLFPNNLALLTRITAIALLVLSLDLVTGYCGVATLGHAALFGSGAYAAGIA 87
           +L+LA +    F      + ++   AL   + +L+ G+ G+ + GHAA  G  AY AG A
Sbjct: 13  LLLLALVLAPFFGAYPVFVMKLMCFALFAAAFNLLLGFTGLLSFGHAAFLGGSAYVAGHA 72

Query: 88  AVHFGITDPLLMLAAGILGGALAGLACGVVILRAHGLPQLVLSIALIHLFHEFANKASSW 147
              +G+T P L L AG L GA  G   GV+ +R  G+   ++++AL  +    A +A  +
Sbjct: 73  MKVWGLT-PELGLIAGTLTGAFLGWVFGVLAIRRQGIYFAMITLALAQMMFFVALQAK-F 130

Query: 148 TGGSDGLAGISPDPLIGLF--AFDLWGRTAYVFGVVLLAIVFVLLRLVVRSPFGMLCRGI 205
           TGG DGL G+    L GL   + DL   T Y   +V++   F+L+   + SPFG + +GI
Sbjct: 131 TGGEDGLQGVPRGKLFGLIDLSSDL---TMYYVALVIVVAAFLLIVRTIHSPFGQVLKGI 187

Query: 206 REDPTRIRAMGASPTIALLKMYVISGAVAGVGGALNAVSTQVVGLDSLSFTLSAESLVML 265
           +E+  R  ++G   +   L  +VIS A++G+ G+L  +      L  + +T S + ++M 
Sbjct: 188 KENEPRALSLGYDVSRFKLLAFVISAALSGLAGSLKTLVLGFATLSDVHWTASGQVILMT 247

Query: 266 VLGGTGSLFGALTGTIVFMFFEDLVSTANPF-------HW-------LTMV-GALLIAVV 310
           ++GG G+L G L G+ V +  E+ +     F        W       +TMV G + +  V
Sbjct: 248 LVGGLGTLSGPLVGSAVVVLLENKIGELGSFLARITTIDWFNTLGESVTMVTGLIFVICV 307

Query: 311 LFAPKGLYGTVAEVLARRRG 330
           L   KG+ G +   + RR+G
Sbjct: 308 LAFRKGIMGEIIAFIERRKG 327