Pairwise Alignments

Query, 333 a.a., branched-chain amino acid ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 335 a.a., branched chain amino acid ABC transporter permease from Agrobacterium fabrum C58

 Score =  145 bits (366), Expect = 1e-39
 Identities = 104/330 (31%), Positives = 170/330 (51%), Gaps = 15/330 (4%)

Query: 4   MSEASTALSAGRRGLGRDLAGLAVILVLAGIGYLLFPNNLALLTRITAIALLVLSLDLVT 63
           M +   + +AG       LAGLAV++      Y +F      L ++   AL   + +L+ 
Sbjct: 13  MPQTEVSTTAGTIKTVLILAGLAVLIAAPMFVYPIF------LMKLLCFALFACAFNLLI 66

Query: 64  GYCGVATLGHAALFGSGAYAAGIAAVHFGITDPLLMLAAGILGGALAGLACGVVILRAHG 123
           GY G+ + GHAA FG  AY    +   +G+T P + L  G+ G AL GL  G   +R  G
Sbjct: 67  GYTGLLSFGHAAFFGGAAYFTAYSVKEWGVT-PEIGLIIGMAGAALLGLVIGFFAIRRQG 125

Query: 124 LPQLVLSIALIHLFHEFANKASSWTGGSDGLAGISPDPLIGLFAFDLWGRTAYVFGVVLL 183
           +   ++++AL  +F+ F  +A  +T G DGL G+    L GL   +       ++  VL 
Sbjct: 126 IYFAMITLALSQMFYFFCLQAP-FTHGEDGLQGVPRGHLFGLLDLNA---PLNIYYTVLA 181

Query: 184 AIVFVLLRL--VVRSPFGMLCRGIREDPTRIRAMGASPTIALLKMYVISGAVAGVGGALN 241
           A V  LL +   V SPFGM+ + IRE+  R  ++G S     L  +V+S A+AG+ G L 
Sbjct: 182 AFVLALLVIWRFVNSPFGMILKSIRENEQRAISLGYSVQRYKLGAFVMSAALAGLAGGLK 241

Query: 242 AVSTQVVGLDSLSFTLSAESLVMLVLGGTGSLFGALTGTIVFMFFEDLVSTANPFHWLTM 301
           A+  Q   L  +++ +S E ++M +LGG G++ G + G  + +  ++ ++T++ F    +
Sbjct: 242 ALVFQFATLTDVTWQMSGEVILMTLLGGIGTMIGPIFGAGLVVTLQNYLATSD-FPVTII 300

Query: 302 VGALLIAVVLFAPKGLYGT-VAEVLARRRG 330
            G + +A VL   +GL G   A  L R+ G
Sbjct: 301 TGLVFMACVLVFRRGLIGEFYASRLGRKLG 330