Pairwise Alignments

Query, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 349 a.a., permease from Sinorhizobium meliloti 1021

 Score =  180 bits (457), Expect = 4e-50
 Identities = 121/336 (36%), Positives = 184/336 (54%), Gaps = 25/336 (7%)

Query: 18  RDVDLRAVA----PFAALALLLIVGAMVNPNFISLNNLANVATRSAFIAIIAVGATFVIS 73
           R   L+AV     P  AL LL+   A    NF++L+NL+NVA +SAF+AI+AVG TFVI 
Sbjct: 19  RKTKLKAVVFQAGPLIALVLLMAYLAFATSNFLTLDNLSNVARQSAFVAILAVGQTFVIL 78

Query: 74  AGDLDLSVGSMVAFVASL--------MILF-MNSGVIADPALMLTAAVLFAVVAGSVCGL 124
            G +DLSV ++ A  AS+        ++LF ++ G +  P      A+L  ++ G   G 
Sbjct: 79  TGGIDLSVAAIAALSASITAVLLTQPLVLFGIDFGFVPPPV-----AILIGILIGMAAGA 133

Query: 125 ANGLITTVGRIEPFIATLGTMGIYRGLTTWLSQGGAITLREP--ELQELYRPAYFGSILG 182
            NG + +  +I  FIATLGTM  +RG    ++ G  +       +L E       G + G
Sbjct: 134 LNGWLISKFKIPDFIATLGTMTAFRGAALLVTDGLPVPSFNAGRQLPESLIWVGGGQLFG 193

Query: 183 MPVPIAIILAVTAVAAFILYRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCV 242
           +PV   I L   A   ++L  T  GR + AVG N   A  SGI+++R + + + I GL  
Sbjct: 194 VPVSALIALLCAAAGWYVLRYTALGRAIYAVGGNRAAAHSSGISISRTKIMTYAISGLLA 253

Query: 243 AVAVLLYVPRLGSTSATTGILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNI 302
           A+A ++ V RL S +A      EL++I +VV+GGT L GG G VWG+I GA I+ ++GN 
Sbjct: 254 AIAGIILVGRLNSANALMADGEELRSIASVVIGGTNLFGGEGGVWGSIIGAAIIGVLGNG 313

Query: 303 MLLSNFISEYLIGAMQGAIIIIAMLV----QRSLVR 334
           + L + +S +     QG +I++ ++     +RS+ R
Sbjct: 314 LNLLD-VSPFWQRIAQGVVIVVVVIFDQWRRRSMTR 348