Pairwise Alignments

Query, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 321 a.a., Ribose ABC transport system, permease protein RbsC (TC 3.A.1.2.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  183 bits (464), Expect = 6e-51
 Identities = 112/320 (35%), Positives = 179/320 (55%), Gaps = 7/320 (2%)

Query: 9   QSTTHRRTWRDVDLRAVAPFAALALLLIVGAMVNPNFISLNNLANVATRSAFIAIIAVGA 68
           Q+ + RR +    L       AL +L+ + + ++PNF ++NNL N+  +++  AI+AVG 
Sbjct: 4   QAVSGRRYFTKAWLLEQKSLIALLVLIAIVSTLSPNFFTVNNLFNILQQTSVNAIMAVGM 63

Query: 69  TFVISAGDLDLSVGSMVAFVASLMILFMNSGVIADPALMLTAAVLFAVVAGSVCGLANGL 128
           T VI    +DLSVGS++A   ++    +   V A        AV  A+  G+  G   G+
Sbjct: 64  TLVILTSGIDLSVGSLLALTGAVAASIVGVEVNA------LVAVAAALALGAAIGAVTGV 117

Query: 129 ITTVGRIEPFIATLGTMGIYRGLTTWLSQGGAITLREPELQELYRPAYFGSILGMPVPIA 188
           I   GR++ FIATL  M + RG+T   + G  +     +  +L+     G  LG+P P+ 
Sbjct: 118 IVAKGRVQAFIATLVMMLLLRGVTMVYTDGSPVNTGFTDNADLFGWFGIGRPLGVPTPVW 177

Query: 189 IILAVTAVAAFILYRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLL 248
           I+  V   A ++L+ TR GR++ A+G N    R SGI+V++V+ I + + GL  ++A ++
Sbjct: 178 IMAIVFIAAWYMLHHTRLGRYIYALGGNEAATRLSGISVSKVKIIVYSLCGLTASLAGII 237

Query: 249 YVPRLGSTSATTGILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNF 308
            V RL S   T G  +EL AI AVV+GGT+L GG GR+ GT+ GA IL  + N + L   
Sbjct: 238 EVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLG- 296

Query: 309 ISEYLIGAMQGAIIIIAMLV 328
           +S Y    ++  +I++A+LV
Sbjct: 297 VSSYYQMIVKAVVILLAVLV 316