Pairwise Alignments

Query, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 343 a.a., Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components from Enterobacter asburiae PDN3

 Score =  166 bits (419), Expect = 1e-45
 Identities = 106/316 (33%), Positives = 174/316 (55%), Gaps = 15/316 (4%)

Query: 23  RAVAPFAALALLLIVGAMVNPNFISLNNLANVATRSAFIAIIAVGATFVISAGDLDLSVG 82
           R ++ F A+  L  V   +NP++  L  L  +   S  + ++A+GA+ V+   ++D+SVG
Sbjct: 8   RELSAFLAILALFAVLVALNPSYFCLQTLGMIFASSQILILLAIGASLVMLTRNIDVSVG 67

Query: 83  SMVAFVASLMILFMNSGVIADPALMLTAAVLFAVVAGSVCGLANGLITTVGRIEPFIATL 142
           S+V   A  + + +NSG        L  ++LFA+  G++ G  NG +    RI   +ATL
Sbjct: 68  SIVGLSAIAVGVALNSGY------SLPVSILFALSIGALAGTFNGFLVVGLRIPAIVATL 121

Query: 143 GTMGIYRGLTTWLSQGGAITLREPELQELYRPAYFG-SILGMPVPIAIILAVTAVAAFIL 201
           GT+G+YRG     + G  I    P L+ L  PA  G S LGM   +A+I+A T   A+ L
Sbjct: 122 GTLGLYRGAMLLWTGGKWIEGLPPGLKSLSEPAAVGISPLGM---LALIIAATG--AWTL 176

Query: 202 YRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTG 261
            RT +GR   AVG N   AR  G+AVNR R IAF + G+  A A +++  ++G     TG
Sbjct: 177 SRTAFGRDFYAVGDNLAAARQLGVAVNRTRMIAFTLNGMLAACAGIVFAAQIGFVPNQTG 236

Query: 262 ILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSN---FISEYLIGAMQ 318
              E++AI A V+GG +L GG G + G + GAF L  +  +++L     + ++++ G + 
Sbjct: 237 SGLEMKAIAACVLGGISLLGGTGTLVGALLGAFFLTQIDTVLVLFRLPAWWNDFIAGLVL 296

Query: 319 GAIIIIAMLVQRSLVR 334
             ++++   ++++L R
Sbjct: 297 LGVLVLDGRLRQALAR 312