Pairwise Alignments

Query, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 321 a.a., ribose ABC transporter permease from Escherichia coli ECRC62

 Score =  184 bits (467), Expect = 3e-51
 Identities = 113/320 (35%), Positives = 178/320 (55%), Gaps = 7/320 (2%)

Query: 9   QSTTHRRTWRDVDLRAVAPFAALALLLIVGAMVNPNFISLNNLANVATRSAFIAIIAVGA 68
           Q+ + RR +    L       AL +L+ + + ++PNF ++NNL N+  +++  AI+AVG 
Sbjct: 4   QTVSGRRYFTKAWLMEQKSLIALLVLIAIVSTLSPNFFTINNLFNILQQTSVNAIMAVGM 63

Query: 69  TFVISAGDLDLSVGSMVAFVASLMILFMNSGVIADPALMLTAAVLFAVVAGSVCGLANGL 128
           T VI    +DLSVGS++A   ++    +   V A        AV  A+  G+  G   G+
Sbjct: 64  TLVILTSGIDLSVGSLLALTGAVAASIVGIEVNA------LVAVAAALALGAAIGAVTGV 117

Query: 129 ITTVGRIEPFIATLGTMGIYRGLTTWLSQGGAITLREPELQELYRPAYFGSILGMPVPIA 188
           I   GR++ FIATL  M + RG+T   + G  +     E  +L+     G  LG+P P+ 
Sbjct: 118 IVAKGRVQAFIATLVMMLLLRGVTMVYTNGSPVNTGFTENADLFGWFGIGRPLGVPTPVW 177

Query: 189 IILAVTAVAAFILYRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLL 248
           I+  V   A ++L+ TR GR++ A+G N    R SGI VN+++ I + + GL  ++A ++
Sbjct: 178 IMGIVFLAAWYMLHHTRLGRYIYALGGNEAATRLSGINVNKIKIIVYSLCGLLASLAGII 237

Query: 249 YVPRLGSTSATTGILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNF 308
            V RL S   T G  +EL AI AVV+GGT+L GG GR+ GT+ GA IL  + N + L   
Sbjct: 238 EVARLSSAQPTAGTGYELDAIAAVVLGGTSLAGGKGRIVGTLIGALILGFLNNGLNLLG- 296

Query: 309 ISEYLIGAMQGAIIIIAMLV 328
           +S Y    ++  +I++A+LV
Sbjct: 297 VSSYYQMIVKAVVILLAVLV 316