Pairwise Alignments

Query, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 332 a.a., putative sugar ABC transporter permease from Escherichia coli BL21

 Score =  177 bits (448), Expect = 4e-49
 Identities = 109/315 (34%), Positives = 171/315 (54%), Gaps = 11/315 (3%)

Query: 22  LRAVAPFAALALLLIVGAMVNPNFISLNNLANVATRSAFIAIIAVGATFVISAGDLDLSV 81
           +  +     +A+L +V ++  P FISLNN  NV   +A I I A   T +I +G++D+SV
Sbjct: 24  INEIGLLVVIAILYLVFSLNAPGFISLNNQMNVLRDAATIGIAAWAMTLIIISGEIDVSV 83

Query: 82  GSMVAFVASLMILFMNSGVIADPALMLTAAVLFAVVAGSVCGLANGLITTVGRIEPFIAT 141
           G MVAFV+  +   +   V       L  A L  ++ G++ G   G++  V  +  F+AT
Sbjct: 84  GPMVAFVSVCLAFLLQFEV------PLAVACLLVLLLGALMGTLAGVLRGVFNVPSFVAT 137

Query: 142 LGTMGIYRGLTTWLSQGGAITLREPELQELYRPAYFGSILGMPVPIAIILAVTAVAAFIL 201
           LG     RG+  +++    + + E E+ +       G  LG+PV   I++ + A+  FI 
Sbjct: 138 LGLWSALRGMGLFMTNALPVPIDENEVLDWLG----GQFLGVPVSALIMIVLFALFVFIS 193

Query: 202 YRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTG 261
            +T +GR V AVG N+  A+  GI V RVR + F + GL  AV  +L   RLGS +A   
Sbjct: 194 RKTAFGRSVFAVGGNATAAQLCGINVRRVRILIFTLSGLLAAVTGILLAARLGSGNAGAA 253

Query: 262 ILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAMQGAI 321
              E   I AVVVGGTAL GG G ++GT+ G  ++ L+GN ++L   I+ +    ++G I
Sbjct: 254 NGLEFDVIAAVVVGGTALSGGRGSLFGTLLGVLVITLIGNGLVLLG-INSFFQQVVRGVI 312

Query: 322 IIIAMLVQRSLVRKS 336
           I++A+L    L ++S
Sbjct: 313 IVVAVLANILLTQRS 327