Pairwise Alignments

Query, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 325 a.a., ribose ABC transporter permease from Agrobacterium fabrum C58

 Score =  181 bits (459), Expect = 2e-50
 Identities = 116/305 (38%), Positives = 172/305 (56%), Gaps = 12/305 (3%)

Query: 27  PFAALALLLIVGAMVNPNFISLNNLANVATRSAFIAIIAVGATFVISAGDLDLSVGSMVA 86
           P A L ++ I+  + + NF S+NN+ NV  + + + I+AVG TFVI  G +DLSVG+++A
Sbjct: 29  PLAGLIVVSILMGLASDNFFSVNNIMNVLRQVSVVGILAVGMTFVILTGGIDLSVGAVMA 88

Query: 87  FVASLMI-LFMNSGVIADPALMLTAAVLFAVVAGSVCGLANGLITTVGRIEPFIATLGTM 145
            V +L   L +N+G+   PA+ L A +      G   G+ NG +   GR+   I TL TM
Sbjct: 89  LVGTLSAGLMVNTGL--SPAIALPAGLFI----GLGIGIFNGALVAWGRMPAIIVTLATM 142

Query: 146 GIYRGLTTWLSQGGAITLREPELQELYRPAYFGSILGMPVPIAIILAVTAVAAFILYRTR 205
           G+ RGL    S GG      P     +     G +   PVP+ I++ + AVA  +L RT 
Sbjct: 143 GMARGLGLIYS-GGYPVSGIPSWISWFGVGRVGIV---PVPVIIMVVIYAVAWVLLQRTA 198

Query: 206 YGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLLYVPRLGSTSATTGILWE 265
           +GRHV A+G N   AR SG+   RV+   + I G+  A A L+   RL S     G+ +E
Sbjct: 199 FGRHVYALGGNELAARLSGVKTRRVKLAVYGISGVTAAFAALILTGRLMSGQPNAGVGFE 258

Query: 266 LQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFISEYLIGAMQGAIIIIA 325
           L AI AVV+GGTA+ GG G + GT+ GA +L ++ N + L   I+ YL   ++G II++A
Sbjct: 259 LDAIAAVVLGGTAIAGGRGLILGTLIGAVLLGILNNGLNLMG-INPYLQDVIKGGIILLA 317

Query: 326 MLVQR 330
           + + R
Sbjct: 318 IYIGR 322