Pairwise Alignments

Query, 336 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 340 a.a., ABC transporter, membrane spanning protein (ribose) from Agrobacterium fabrum C58

 Score =  169 bits (427), Expect = 1e-46
 Identities = 101/321 (31%), Positives = 172/321 (53%), Gaps = 21/321 (6%)

Query: 25  VAPFAALALLLIVGAMVNPN---FISLNNLANVATRSAFIAIIAVGATFVISAGDLDLSV 81
           +  FAAL  L  + A+ +     F ++NN   +A +   IA++ +GAT VI  G +DLSV
Sbjct: 21  IQKFAALGSLFALVAVFSATSNAFFTVNNGMTIALQVTSIALLGIGATCVIITGGIDLSV 80

Query: 82  GSMVAFVASLMILFMNSGVIADPALMLTAAVLFAVVAGSVCGLANGLITTVGRIEPFIAT 141
           GS++A    +  L      + +  + +   +L  ++ GS+CGL NGL+ T  ++ PFIAT
Sbjct: 81  GSVLALAGVVAAL-----AVKELGMPVPIGMLLGILTGSLCGLINGLLVTRFKLPPFIAT 135

Query: 142 LGTMGIYRGLTTWLSQGGAITLREPELQELYRPAYFGSIL------------GMPVPIAI 189
           LG M I RG+   ++   A++       EL   A F  +             G+P P+ +
Sbjct: 136 LGMMLIARGVALQITGARAVSGLGESFGELGNGALFRIVTIGDDGFPNVVFPGIPYPVIL 195

Query: 190 ILAVTAVAAFILYRTRYGRHVVAVGSNSDVARYSGIAVNRVRTIAFVIQGLCVAVAVLLY 249
           ++ +    +F+L R+  GRH+ AVGSN+D AR SG+ V RV    +++ G    +   + 
Sbjct: 196 MVVIALAVSFMLNRSILGRHIYAVGSNADAARLSGVNVARVTNFTYILSGTLAGLTGCVL 255

Query: 250 VPRLGSTSATTGILWELQAITAVVVGGTALKGGAGRVWGTICGAFILELVGNIMLLSNFI 309
           + RL +     G+++EL AI + V+GGT+L GG G + GT  GAF++ ++ N  L  N +
Sbjct: 256 MSRLVTAQPNEGVMYELDAIASAVIGGTSLIGGVGTISGTAIGAFVIGILRN-GLNMNGV 314

Query: 310 SEYLIGAMQGAIIIIAMLVQR 330
           S +    + G +I++ + + +
Sbjct: 315 SAFTQQIIIGLVILVTVWIDQ 335