Pairwise Alignments

Query, 513 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 510 a.a., sugar ABC transporter ATP-binding protein from Paraburkholderia sabiae LMG 24235

 Score =  444 bits (1141), Expect = e-129
 Identities = 235/500 (47%), Positives = 337/500 (67%), Gaps = 3/500 (0%)

Query: 14  SGAVPKSEYLLTAEGVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIY 73
           S A P  E LL   GV K FPGVVALD ++  L+ G VHA+ GENGAGKSTLMKI++G Y
Sbjct: 8   SFAPPAEEDLLRLRGVGKRFPGVVALDGIDLDLRAGEVHAVCGENGAGKSTLMKIISGQY 67

Query: 74  YPDQGEVKLRGAGIRLKSPLDALENGIAMIHQELNLMPFMTVAENIWIRREPKNRFGFVD 133
             D+G V  RGA ++  S  +A   GIA+IHQELNL+P ++VAENI++ REPK R  FVD
Sbjct: 68  RADEGTVCYRGAPVQFASTSEAQAAGIAIIHQELNLVPHLSVAENIYLAREPK-RGPFVD 126

Query: 134 HGEMRRMTAKLFERLKIDLDPEIEVRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTE 193
           +  +     +  +R+ +++ P   V  LS+A +QMVEIAKA+S ++ VLIMDEPTS+LTE
Sbjct: 127 YRTLNANARQCLQRIGLNVSPVTLVGALSIAQQQMVEIAKALSLDARVLIMDEPTSSLTE 186

Query: 194 REVAHLFEIIRDLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDII 253
            E   LF IIR+LR+ G+ I+YI+H+++E+ EI D  +V RDG++I T      + ++I+
Sbjct: 187 SETVQLFRIIRELRADGVAILYISHRLDEMAEIVDRVTVLRDGRHIATSDFASTSINEIV 246

Query: 254 RMMVGREITQMFP-KEEVPIGDVVLSVKNLTLNGVFRDVSFDVRAGEILGVAGLVGSGRS 312
             MVGR +   +P ++  P G+++L V++L   G F  VSF++R GEILG AGL+G+GR+
Sbjct: 247 ARMVGRPLDDAYPPRQSTPTGELLLRVRDLQRTGTFGPVSFELRKGEILGFAGLMGAGRT 306

Query: 313 NVAETLFGVTPASSGTIAIDGKEVVIDSANKAIRHRMAFLTEDRKDTGCLLILDILENMQ 372
            VA  +FG     SG+I +    V I S  +AIRH +A+L+EDRK  G  L + +  N+ 
Sbjct: 307 EVARAIFGADRPDSGSILLGDTPVSIGSPREAIRHGIAYLSEDRKKDGLALSMPVSANIT 366

Query: 373 IAVLQDKFVKRGFVSEREVTAACEEMSRKLRVKTPNLQERVENLSGGNQQKVLIGRWLLT 432
           +A ++     RGF+   E  A      R+L ++TP +++  +NLSGGNQQK++I +WL  
Sbjct: 367 LANVR-AISSRGFLRFSEEAAVAGRYVRELGIRTPTVRQIAKNLSGGNQQKIVISKWLYR 425

Query: 433 NPRILILDEPTRGIDVGAKAEIHRLVTELARNGVAVIMISSEMPEVLGMSDRIMVMHEGR 492
             RIL  DEPTRGIDVGAK  I+ L+  LA +GV V++ISSE+PE+LGM+DRI V HEGR
Sbjct: 426 GSRILFFDEPTRGIDVGAKYAIYGLMDRLASDGVGVVLISSELPELLGMTDRIAVFHEGR 485

Query: 493 VTGILDRAEATQIKVMELAA 512
           +T +L+ ++ +Q +++  A+
Sbjct: 486 ITAVLETSQTSQEEILHHAS 505



 Score = 85.5 bits (210), Expect = 4e-21
 Identities = 62/250 (24%), Positives = 121/250 (48%), Gaps = 11/250 (4%)

Query: 16  AVPKSEYLLTAEGVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYP 75
           + P  E LL    +++          V F+L++G +    G  GAG++ + + + G   P
Sbjct: 263 STPTGELLLRVRDLQR----TGTFGPVSFELRKGEILGFAGLMGAGRTEVARAIFGADRP 318

Query: 76  DQGEVKLRGAGIRLKSPLDALENGIAMIHQELN---LMPFMTVAENIWIR--REPKNRFG 130
           D G + L    + + SP +A+ +GIA + ++     L   M V+ NI +   R   +R G
Sbjct: 319 DSGSILLGDTPVSIGSPREAIRHGIAYLSEDRKKDGLALSMPVSANITLANVRAISSR-G 377

Query: 131 FVDHGEMRRMTAKLFERLKIDLDPEIEV-RHLSVANRQMVEIAKAVSYESDVLIMDEPTS 189
           F+   E   +  +    L I      ++ ++LS  N+Q + I+K +   S +L  DEPT 
Sbjct: 378 FLRFSEEAAVAGRYVRELGIRTPTVRQIAKNLSGGNQQKIVISKWLYRGSRILFFDEPTR 437

Query: 190 ALTEREVAHLFEIIRDLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTR 249
            +       ++ ++  L S G+G+V I+ ++ EL  + D  +VF +G+      +++ ++
Sbjct: 438 GIDVGAKYAIYGLMDRLASDGVGVVLISSELPELLGMTDRIAVFHEGRITAVLETSQTSQ 497

Query: 250 DDIIRMMVGR 259
           ++I+    GR
Sbjct: 498 EEILHHASGR 507