Pairwise Alignments

Query, 513 a.a., sugar uptake ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 501 a.a., ribose ABC transporter ATP-binding protein RbsA from Dickeya dianthicola 67-19

 Score =  437 bits (1125), Expect = e-127
 Identities = 228/489 (46%), Positives = 324/489 (66%), Gaps = 1/489 (0%)

Query: 23  LLTAEGVRKEFPGVVALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGEVKL 82
           LL  +G+ K FPGV AL      +  G V AL+GENGAGKST+MK+L GIY  D G +  
Sbjct: 4   LLQLQGITKTFPGVKALSGAALNVYPGKVMALVGENGAGKSTMMKVLTGIYRKDAGSIHF 63

Query: 83  RGAGIRLKSPLDALENGIAMIHQELNLMPFMTVAENIWIRREPKNRFGFVDHGEMRRMTA 142
            G  +    P  + E GI +IHQELNL+P +T+AENI++ RE  NR G +D   M     
Sbjct: 64  LGKDVDFSGPKASQEAGIGIIHQELNLIPQLTIAENIFLGREFTNRLGRIDWKRMYAEAD 123

Query: 143 KLFERLKIDLDPEIEVRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHLFEI 202
           KL +RL +  D    V  LS+ ++QMVEIAK +S+ES V+IMDEPT ALT+ E A LF +
Sbjct: 124 KLLKRLNLRYDSRRLVGELSIGDQQMVEIAKVLSFESRVIIMDEPTDALTDTETASLFGV 183

Query: 203 IRDLRSQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMVGREIT 262
           I++L+SQG GIVYI+H++ E+FEI D+ +VFRDG++IG    +E+  D +I MMVGR++ 
Sbjct: 184 IKELQSQGCGIVYISHRLKEIFEICDDVTVFRDGQFIGERPVSELQEDSLIEMMVGRKLE 243

Query: 263 QMFPKEEVPIGDVVLSVKNLTLNGVFRDVSFDVRAGEILGVAGLVGSGRSNVAETLFGVT 322
           + +P+     G+V L V  L+  GV  +VSF +R GEILGVAGL+G+GR+ + + L+G  
Sbjct: 244 EQYPRLNQAPGEVRLQVSELSGPGV-ENVSFTLRKGEILGVAGLMGAGRTELMKVLYGAL 302

Query: 323 PASSGTIAIDGKEVVIDSANKAIRHRMAFLTEDRKDTGCLLILDILENMQIAVLQDKFVK 382
           P + G + +DGK+VV  S    +   + +++EDRK  G +L + + ENM +  L+     
Sbjct: 303 PRTHGKVHLDGKDVVTRSPQDGLASGIVYISEDRKHDGLVLGMSVKENMSLTALRYFSNA 362

Query: 383 RGFVSEREVTAACEEMSRKLRVKTPNLQERVENLSGGNQQKVLIGRWLLTNPRILILDEP 442
            G +   +   A  +  R   ++TP++ + +  LSGGNQQKV I R L+T PR+LILDEP
Sbjct: 363 AGSLRHGDEQQAVSDFIRMFNIRTPSMSQPIGLLSGGNQQKVAIARGLMTRPRVLILDEP 422

Query: 443 TRGIDVGAKAEIHRLVTELARNGVAVIMISSEMPEVLGMSDRIMVMHEGRVTGILDRAEA 502
           TRG+DVGAK EI++L+ +  + G+++I++SSEMPEVLGMSDRI+VMHEGR++G     +A
Sbjct: 423 TRGVDVGAKKEIYQLINQFKQEGLSIILVSSEMPEVLGMSDRIIVMHEGRLSGEFPIEQA 482

Query: 503 TQIKVMELA 511
           TQ  +M  A
Sbjct: 483 TQETLMAAA 491



 Score = 97.1 bits (240), Expect = 1e-24
 Identities = 64/233 (27%), Positives = 118/233 (50%), Gaps = 9/233 (3%)

Query: 34  PGVVALDDVEFKLKRGTVHALMGENGAGKSTLMKILAGIYYPDQGEVKLRGAGIRLKSPL 93
           PGV   ++V F L++G +  + G  GAG++ LMK+L G      G+V L G  +  +SP 
Sbjct: 266 PGV---ENVSFTLRKGEILGVAGLMGAGRTELMKVLYGALPRTHGKVHLDGKDVVTRSPQ 322

Query: 94  DALENGIAMIHQELN---LMPFMTVAENIWIR--REPKNRFGFVDHGEMRRMTAKLFERL 148
           D L +GI  I ++     L+  M+V EN+ +   R   N  G + HG+ ++  +      
Sbjct: 323 DGLASGIVYISEDRKHDGLVLGMSVKENMSLTALRYFSNAAGSLRHGDEQQAVSDFIRMF 382

Query: 149 KIDLDPEIE-VRHLSVANRQMVEIAKAVSYESDVLIMDEPTSALTEREVAHLFEIIRDLR 207
            I      + +  LS  N+Q V IA+ +     VLI+DEPT  +       ++++I   +
Sbjct: 383 NIRTPSMSQPIGLLSGGNQQKVAIARGLMTRPRVLILDEPTRGVDVGAKKEIYQLINQFK 442

Query: 208 SQGIGIVYITHKMNELFEIADEFSVFRDGKYIGTHLSNEVTRDDIIRMMVGRE 260
            +G+ I+ ++ +M E+  ++D   V  +G+  G     + T++ ++   VG++
Sbjct: 443 QEGLSIILVSSEMPEVLGMSDRIIVMHEGRLSGEFPIEQATQETLMAAAVGKQ 495