Pairwise Alignments

Query, 303 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 326 a.a., putative membrane protein from Variovorax sp. SCN45

 Score =  105 bits (263), Expect = 1e-27
 Identities = 80/291 (27%), Positives = 134/291 (46%), Gaps = 7/291 (2%)

Query: 11  SRENGAARAGVVVMLLGMLMFSVNDVMGKWLVATYSVGQVVLIRSIAAALLLAPFLWVSG 70
           S E+    AG+ +++L    F+  D   K+      +   V  R    A+     L    
Sbjct: 30  SIESERILAGIGLVVLATACFATLDTATKFSTLGVPILMGVWFRYAFQAVATTAVLLPLH 89

Query: 71  PKKLFTLERPGLQLARVVASTAEVVAFYFAVVYLPLADVMTYWLAAPIYVAAVSPLVLKE 130
              L   + P  Q  R     +  V  + ++ Y+PLA+  +  L AP+ +  ++   LKE
Sbjct: 90  GTALLRTQHPRYQALRGALLLSSSVFSFLSLRYMPLAEFTSIVLIAPLVITLLAATTLKE 149

Query: 131 PVGWRRWTAIGIGFVGVVVALEPSSQAFTLPAVISILGSMTFAFMMISGRSLRGT--PDT 188
            V   RWT +  GF G +V L P    F+   ++ +   +T A+  +    L  T  P T
Sbjct: 150 HVSPLRWTLVAGGFAGTLVILRPGGGTFSWAILLPLGLVLTNAWFQVLTSKLAQTENPLT 209

Query: 189 TLAFWQIVGAAVAGLVWAPFDWTPLKPLDT-ALICLLGAVAMIAHVLVNRALKLADAATV 247
              +   +G  +A LV  PF WT L   +  AL+CL+G +  + H ++  A + A A+T+
Sbjct: 210 MHFYTGWIGTLIASLV-VPFAWTALPSWEWWALLCLMGFMGTVGHFMLILAYQRAPASTL 268

Query: 248 APLQYTLLFWAIFFGWLIFGDTPRLSMVIGAALIV---ASGLFIFFREQQL 295
            P  Y  + +A+  GWLIF   P    +IG A+I    A+G ++  RE+++
Sbjct: 269 TPYLYAQIAFAMLGGWLIFSHVPDRFSLIGMAMIAVCGAAGAWLTVRERRV 319