Pairwise Alignments

Query, 554 a.a., regulatory protein from Sinorhizobium meliloti 1021

Subject, 553 a.a., Type III secretion transcriptional activator HilA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 85.1 bits (209), Expect = 6e-21
 Identities = 108/500 (21%), Positives = 212/500 (42%), Gaps = 53/500 (10%)

Query: 25  QFMFGDYVLDQERRELTRRGQVVSVGPQVFDLLLHLVGTRDRVVSKDELLQAVWGGRIVS 84
           +F+F D++L+ +   L R  + V++ P+ + +L+ L+     +VSK+ LL  VWG   V+
Sbjct: 13  KFVFDDFILNMDG-SLLRSEKKVNIPPKEYAVLVILLEAAGEIVSKNTLLDQVWGDAEVN 71

Query: 85  ESTITSHINAVRKAIGDTGGEQRLIRTVARKGFRFVGDIRIGGIGEVRQPVGPGAALQAS 144
           E ++T  I A+R+ + +   E R I T+  +G+RF   + +         V P A     
Sbjct: 72  EESLTRCIYALRRILSE-DKEHRYIETLYGQGYRFNRPVVV---------VSPPAP---- 117

Query: 145 GGSGETASALVLPDKPSITVLPFQNLSGDPEQEYFADGIVEDIITALSRIRWLFVIARNS 204
                       P   ++ +LPFQ      + +  ++ +   I+  LS+     +     
Sbjct: 118 -----------QPTTHTLAILPFQ-----MQDQVQSESLHYSIVKGLSQYAPFGLSVLPV 161

Query: 205 SFRYKGRAV-EVKDVGRELGVRYVLEGSVRKSGNRVRITGQLIDATTGTHLWAERFEGTL 263
           +     R+V ++ ++  +L   Y + G +   GN   +  +++    G HL  +      
Sbjct: 162 TITKNCRSVKDILELMDQLRPDYYISGQMIPDGNDNIVQIEIV-RVKGYHLLHQ------ 214

Query: 264 DDIFELQDRMAESVVGAIAPQVERA----EMERAKRKPTESLDAHDYYLRGMAKLHSGTH 319
           + I  ++ + A  +   IA  + R       +  +     S+D+   YLRG  +L+  T 
Sbjct: 215 ESIKLIEHQPASLLQNKIANLLLRCIPGLRWDTKQISELNSIDSTMVYLRGKHELNQYTP 274

Query: 320 EAIEAALPLFYRAIELDQEFASAYAGAAWCYFWRKLNGWMVDRAEEIAEGARLARRAVEL 379
            +++ AL L  + + +     + Y   A CY      G + D+   + +    A +A EL
Sbjct: 275 YSLQQALKLLTQCVNMSPNSIAPYCALAECYLSMAQMG-IFDKQNAMIKAKEHAIKATEL 333

Query: 380 GRDDAVALTRSGHALGHLVGDLDGGIALIDRARLLNPNFAPAWFLGGFLRVFRGEPESAI 439
             ++  AL   G  +  +  +   G  L  +A LL+P  A   +  G+     G+ E A+
Sbjct: 334 DHNNPQALGLLG-LINTIHSEYIVGSLLFKQANLLSPISADIKYYYGWNLFMAGQLEEAL 392

Query: 440 EHIEHAARLSPLDQEMFRMQAGTA---LAHFFAGRFDSALVWAERALGNLPSLLVAVALV 496
           + I    +L P      R  AG     + ++  G  D+  +  E    +L    + +++ 
Sbjct: 393 QTINECLKLDPT-----RAAAGITKLWITYYHTGIDDAIRLGDELRSQHLQDNPILLSMQ 447

Query: 497 AASHALAGRTEEARKTMQRL 516
               +L G+ E ARK  + +
Sbjct: 448 VMFLSLKGKHELARKLTKEI 467