Pairwise Alignments

Query, 564 a.a., peptidase, arginine utilization protein RocB from Sinorhizobium meliloti 1021

Subject, 379 a.a., succinyl-diaminopimelate desuccinylase from Magnetospirillum magneticum AMB-1

 Score = 52.8 bits (125), Expect = 2e-11
 Identities = 77/321 (23%), Positives = 113/321 (35%), Gaps = 49/321 (15%)

Query: 37  TPGEASFADRLHGLLGELPYFREHPQDLGLLASHGEPLTRNVVALVRGTGKRTLVMAGHF 96
           TP +A   D L G L EL +   H     + ++ G P  RN+ A + GT    L  AGH 
Sbjct: 20  TPEDAGALDVLAGALEELGFACHH-----IRSATGGPEIRNLYARL-GTEAPNLCFAGHT 73

Query: 97  DTVSTDNYHELKALACDSLALKDALIESLSARTGRSEQEERALQDLASGDFLPGRGLLDM 156
           D V                  K   +E  +A   +                L GRG  DM
Sbjct: 74  DVVPPG---------------KGWTVEPFAAGIDQGR--------------LFGRGSADM 104

Query: 157 KSGLAVAIACLEQFAADTDRQGNLMLVATPDEERESRGMRSLRDALPGLVRDFDIEIAGG 216
           K  +A  +A + +   D   +G+L L+ T DEE           A+ G V+  D   A G
Sbjct: 105 KGAIACFVAAVARLLEDGAPKGSLSLLITGDEE---------GPAVDGTVKVLDWLAARG 155

Query: 217 INLD---VTSDQGDGSEGRAVYAGTIGKLLPFALVIGCSSHASYPFEGVSAQAMAAGILA 273
             +D   V         G  +  G  G L     V G   H++YP    +       IL 
Sbjct: 156 ERIDCCIVGEPTNPRKLGDMMKIGRRGSLNCRLTVFGTQGHSAYPHLADNPIPRLLDILR 215

Query: 274 RLEGNASLADRDDNDISPPPICLEAKDLRDGYEVTTPERFWIAFNWLYHSMTADALFERF 333
           RL    +  D          + L   D+ +      P      FN  ++ + + A  ER+
Sbjct: 216 RL--TEAPLDEGTPHFQASTLALTTVDVGNPATNVIPAEARAGFNIRFNDLHSGASLERW 273

Query: 334 REEVLTGANEAIETFAAQSAE 354
             + +  A   +E     S E
Sbjct: 274 IRDTVAQAGGEVEIKVEVSGE 294