Pairwise Alignments

Query, 564 a.a., peptidase, arginine utilization protein RocB from Sinorhizobium meliloti 1021

Subject, 375 a.a., succinyl-diaminopimelate desuccinylase from Dickeya dianthicola ME23

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 62/260 (23%), Positives = 99/260 (38%), Gaps = 43/260 (16%)

Query: 83  RGTGKRTLVMAGHFDTVSTDNYHELKALACDSLALKDALIESLSARTGRSEQEERALQDL 142
           RG GK TL  AGH D V T + ++ +    +  A++D +                     
Sbjct: 55  RGQGK-TLAFAGHTDVVPTGDNNQWQTPPFEP-AIRDGM--------------------- 91

Query: 143 ASGDFLPGRGLLDMKSGLAVAIACLEQF-AADTDRQGNLMLVATPDEERESRGMRSLRDA 201
                L GRG  DMK  LA  +   E+F AA  + QG L  + T DEE           A
Sbjct: 92  -----LYGRGAADMKGSLAAMVVAAERFVAAHPNHQGRLAFLITSDEE---------ASA 137

Query: 202 LPGLVRDFDIEIAGGINLD---VTSDQGDGSEGRAVYAGTIGKLLPFALVIGCSSHASYP 258
           + G V+  +  +A    L+   V         G  V  G  G +     + G   H +YP
Sbjct: 138 VNGTVKVVETLMARQERLEYCLVGEPSSTDRVGDVVKNGRRGSITANLRIHGVQGHVAYP 197

Query: 259 FEGVSAQAMAAGILARLEGNASLADRDDNDISPPPICLEAKDLRDGYEVTTPERFWIAFN 318
              ++   +   I A  E  A++ D+ +    P  + +   +   G     P    + FN
Sbjct: 198 H--LADNPVHRAIPALNELVATVWDQGNEFFPPTSMQIANINAGTGSNNVIPGELDVQFN 255

Query: 319 WLYHSMTADALFERFREEVL 338
           + + +   D L ++  E +L
Sbjct: 256 FRFSTELTDELIKQQVEALL 275