Pairwise Alignments

Query, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 288 a.a., Ku protein from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  238 bits (608), Expect = 9e-68
 Identities = 118/287 (41%), Positives = 187/287 (65%), Gaps = 1/287 (0%)

Query: 1   MAPRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELGLVERS 60
           MA R +W+G+++LSLV+CPV LY AT+++  + F+ ++ DT+NRI M P DP+ G VERS
Sbjct: 1   MAARPTWQGHLKLSLVTCPVALYTATTSTNDVRFHLINPDTNNRIRMVPTDPDAGPVERS 60

Query: 61  DLVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGAM 120
           DLV+GYE    +Y++ +D+D + V++ES  T++I+ FVD   +D +Y D P+++ P+   
Sbjct: 61  DLVRGYEVSKDEYVLFDDADFDKVKLESTKTISIDKFVDEDDIDRLYWDDPFFVVPEKGA 120

Query: 121 AEETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADYFG 180
             E F V+R+A+ + GK+A+ +LVL  +ER + +  R  G+   TLR  +EVR + +YF 
Sbjct: 121 GVEAFAVIRDAMEKQGKVALGQLVLRGKERQLALEVRGKGLIAYTLRAHDEVRDSDEYFD 180

Query: 181 NIPVGKPDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGHKPIIAQA-PE 239
           +IP  K DP+M+++A  +I QK   FDP  ++D Y+ AL  MI+ K KG K ++  A P+
Sbjct: 181 DIPTVKADPDMVEIAARIIGQKEADFDPTDFKDGYDDALRAMIKAKSKGGKGVVDVAEPD 240

Query: 240 RGNVVNLMDALKASLSQAKPPARSKPKAEPAAKEPAAKAAAAKRVTA 286
             NV++LM AL+ SL  +    +     +  A++ A K AAAK+ TA
Sbjct: 241 DTNVIDLMAALRNSLKGSATGTKKPAAKKVPAQKAAPKKAAAKKKTA 287