Pairwise Alignments

Query, 294 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 298 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  203 bits (516), Expect = 4e-57
 Identities = 115/296 (38%), Positives = 177/296 (59%), Gaps = 5/296 (1%)

Query: 1   MAPRASWKGYIRLSLVSCPVRLYPATSASERISFNQLHKDTHNRINMKPVDPELG-LVER 59
           +APRA+WKG+I+   V+CPV LY A S+SERI+FN L++ T NR+  + VD E G  VER
Sbjct: 2   VAPRANWKGFIKYGEVACPVALYTAASSSERIAFNTLNRKTGNRVKREFVDSETGDPVER 61

Query: 60  SDLVKGYEYEDKKYIIIEDSDLESVRIESNHTMNIEAFVDAGSVDVIYQDAPYYLAPDGA 119
            + VKGYE E+ +YII+E  ++ +   +S+ T+ I+AF+    +D +Y D PYYLAPD  
Sbjct: 62  DEQVKGYEVENGQYIILEPEEVAAAVPDSDKTLKIDAFIPCHEIDDVYFDKPYYLAPD-K 120

Query: 120 MAEETFVVLREALRRSGKLAIARLVLSSRERVVTIGPRETGMFVCTLRNPNEVRGTADYF 179
           M  + F++LR+ ++++   AIAR VL  R R V I P   G+   TL    EVR + + F
Sbjct: 121 MGTDAFLLLRDGMKKAKVAAIARTVLFRRVRTVLIRPHGKGLIATTLNFDYEVRSSQEAF 180

Query: 180 GNIPVGKPDPEMLQLAEALIEQKTTTFDPKQYEDRYEVALMQMIREKLKGHKPIIAQAPE 239
             +P  K + EML+LAE +I  K  +FD   ++DRYE A+ ++++ K++G      +AP 
Sbjct: 181 EELPDLKIEGEMLELAEHIIGTKKGSFDASAFDDRYEAAVAELVKAKIEGRALPKKKAPP 240

Query: 240 RGNVVNLMDALKASLSQAKPPARSKPKA---EPAAKEPAAKAAAAKRVTAKPAAKK 292
                +L+ AL+ S       A  +  A   +  +++  AKAAAAK  +A    ++
Sbjct: 241 ASKPSDLLQALRESAGVVAKAASKRTAANVNKGTSRQKVAKAAAAKTKSAASQTRR 296