Pairwise Alignments

Query, 305 a.a., sugar uptake ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., ABC transporter for Lactose, permease component 1 (from data) from Sinorhizobium meliloti 1021

 Score =  147 bits (372), Expect = 2e-40
 Identities = 92/295 (31%), Positives = 151/295 (51%), Gaps = 6/295 (2%)

Query: 12  RRRPKRQAGWRGLIYIAPAMALVTLFFVLPVLFTLWMSLHKWPLLGEPAWIGLRNYTRMF 71
           RR   R     G +++APA+ L+TLF V P+ ++LWMS      +    + G  N  R++
Sbjct: 5   RRGIGRYYDVNGWLFVAPALGLITLFMVYPIAWSLWMSFQSGRGM-TLKFAGFANIVRLW 63

Query: 72  TDARFFNALGFTAHYTLIVTIAIFAVAFPLAIFVEKQRPLV-SLYRTIVFLPVVVGLASA 130
            D  F  AL  T  Y ++    +  +A  LA  +   R +   ++RT +FLP V  L + 
Sbjct: 64  NDPVFIKALTNTMTYFVVQVPIMILLALILASLLNNPRLVGRGVFRTAIFLPCVSSLVAY 123

Query: 131 SLLWVWLANVDSGLFAPLFDMLGLTSGRINLLAKFDTAFLTIIVMVVWKIAGFTMIILLT 190
           S+L+  +   D G+       +GL +  I  L     A + +I+ + W+  G+ MI  L 
Sbjct: 124 SVLFKGMFATD-GIVNSTLQAIGLAASPIPWLTHPFWAKVLVILAITWRWTGYNMIFYLA 182

Query: 191 GLQAIPAELTEAARIDGAGRWQRFRHLTLPLMRRTMALALILSVTGSILAFDQFYIMT-- 248
            LQ I   + E ARIDG   W R  HLT+PL++  +    ++S  G++  FD+ Y +T  
Sbjct: 183 ALQNIDKSIYEVARIDGVPAWARLTHLTIPLLKPVILFTTVISTIGTLQLFDEVYNLTEG 242

Query: 249 SGGPQNKMISVVYYIFNQSFVSF-NLGYGAALSIALLLILVTLSVVQLWLLKVGD 302
            GGP N  +++  YI+N +F    NLGY A +S  +++++  L+ VQ +  +  D
Sbjct: 243 KGGPSNATLTLSLYIYNLTFRFMPNLGYAATVSYVIVVLVALLAFVQFFAARERD 297