Pairwise Alignments

Query, 332 a.a., sugar ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 330 a.a., ribose ABC transporter permease from Pseudomonas simiae WCS417

 Score =  161 bits (408), Expect = 2e-44
 Identities = 98/300 (32%), Positives = 167/300 (55%), Gaps = 8/300 (2%)

Query: 19  PGLAFVAVVLVFGIASPQFLSAATFGSVAFQLPELGLLTLAMLLPILTGGLNLAITFTAN 78
           P +  V V LV  +AS  FL+A+   ++A Q+    ++ + M   ILTGG++L++     
Sbjct: 34  PFVGLVVVTLVMILASDTFLTASNLSNIARQVSINAIIAVGMTCVILTGGIDLSVGPVMA 93

Query: 79  LAGLTLAWVLKANGGADAGFGIFLVGSLLAVMVGAASGVVMGLVIAFTRAHPILVSLSMM 138
           L+G   A ++ A  G   G  I        +++G A G+  GL +A+    PI+V+L+ M
Sbjct: 94  LSGTLTAGLMVA--GLPPGLAIGA-----GMLIGVAFGIGNGLFVAYLHMPPIIVTLATM 146

Query: 139 IFLRGLGEFLTRGGDISGFPPFVGVIGHGSVAGIPVPLIVFVVCVLAWHLLLGRTKLGFN 198
              RGLG   T G  ISG P +    G  S+ GI VP+++ ++  L  ++LL  T++G  
Sbjct: 147 GIARGLGLMYTDGYPISGLPDWFAFFGRESLFGIQVPILIMLLTYLVAYVLLQHTRIGRY 206

Query: 199 TYMIGSNLEATRYSGINTRKAIVLVYTLSGVMCSIAGIIMLARFNSVRIGHGESYLLITV 258
            Y IG N EA R SG+   +  +LVY +SG+  +IAG+++ +R  S +   G S+ L  +
Sbjct: 207 IYAIGGNEEAVRLSGVRAARFKLLVYGISGLTAAIAGLVLTSRLMSGQPNAGVSFELDAI 266

Query: 259 LACFLGGVNPFGGFGRVIPVFVALVVLQLLSSGLNLIGANQHLATAV-WGILLVGVMILR 317
            A  LGG +  GG G ++   +  ++L +L++GLN++G + ++ + +  GI+L+ + I R
Sbjct: 267 AAVVLGGASIAGGRGVIVGTLLGAMLLGVLNNGLNMLGVSPYVQSVIKGGIILLAIFISR 326