Pairwise Alignments

Query, 356 a.a., catabolite repressor protein from Sinorhizobium meliloti 1021

Subject, 331 a.a., catabolite repressor/activator from Pseudomonas sp. SVBP6

 Score =  111 bits (278), Expect = 2e-29
 Identities = 86/327 (26%), Positives = 151/327 (46%), Gaps = 20/327 (6%)

Query: 13  DLSVLSGSSPSTVSAVLNGTWRKRRIKESTAELIRSLAETHQYTANRQARGLRSSRSGLV 72
           D++ L+G S +T S V+NG   ++RI  ST E +R++ E H +T N QA GLRS  +  +
Sbjct: 5   DIARLAGVSVTTASYVINGKAEQQRISNSTVERVRAVVEAHGFTPNPQAAGLRSRHTRTL 64

Query: 73  GLLLPVHDNRYFSSLAQTFEAHVRSKGQCPIVVSASRDPEEERRTAETLISYSIDELFIC 132
           G +LP  +N  ++ +A+  E   R++G   ++ S+   PE ER+  +   +   D LF+ 
Sbjct: 65  GFILPDLENPSYARIAKQLEQRARAQGYQLLIASSDDQPESERQLQQLFRARRCDALFVA 124

Query: 133 GATDP-DGVHEVCEAAGLRHINID--LPGTKVPSVISDNFEGGRLLTEAIIRHFPAERPL 189
               P D  +   +A GL  I ID  L      S++SD+    + LT +++   PA    
Sbjct: 125 SCLPPEDDSYRELQAKGLPIIAIDRSLDPAHFCSIVSDDRNASQQLTRSLLATQPAH--- 181

Query: 190 EPDDLYLFGGRDD-HATRERIRGFRAVKSDLLGADPDECIWPTGYAADNARKAFEAFYEQ 248
               + L G R +   ++ R  GF        G      +    ++ +  ++      E+
Sbjct: 182 ----IALIGARPELSVSQARAGGFDQALEGFSG--KISRLQGEAFSRECGQRLMNQLIEE 235

Query: 249 HGKLPRGFFVNSSINFEGLLRFMAEHPLENFTDLVVGCYDYDPFASFLPFPVIMIRQNIE 308
            G+LP      S +  +G+   +   P ++   L +G +  +    FLP PV  + Q   
Sbjct: 236 LGRLPDALVTTSYVLLQGVFDVLQARPADS-RSLQLGTFGDNQLLDFLPLPVNAMAQQ-H 293

Query: 309 GMIAK-----AFEVIEEPRASLQIHMI 330
           G+IA+     A   +E+ +    +H I
Sbjct: 294 GLIAETALKLALAAVEQKQYEPGVHAI 320