Pairwise Alignments

Query, 356 a.a., catabolite repressor protein from Sinorhizobium meliloti 1021

Subject, 340 a.a., LacI family DNA-binding transcriptional regulator from Pseudomonas sp. SVBP6

 Score = 74.7 bits (182), Expect = 3e-18
 Identities = 81/351 (23%), Positives = 145/351 (41%), Gaps = 24/351 (6%)

Query: 9   ATIYDLSVLSGSSPSTVSAVLNGTWRKRRIKESTAELIRSLAETHQYTANRQARGLRSSR 68
           ATI D++ L+G S +TVS VLN T   R + E     + +      Y  +  AR L++  
Sbjct: 2   ATIKDVAALAGISYTTVSHVLNKT---RPVSEPVRLKVEAAIAELDYVPSAVARSLKARS 58

Query: 69  SGLVGLLLPVHDNRYFSSLAQTFEAHVRSKGQCPIVVSASRDPEEERRTAETLISYSIDE 128
           +  +GLL+P   N YF+ LA+  E      G C I+ ++  +P+++R     L+   ID 
Sbjct: 59  TATIGLLVPNSVNPYFAELARGIEDGCERNGYCVILCNSDDNPQKQRSYLRVLLEKRIDG 118

Query: 129 LFICGATDPDGVHEVCEAAGLRHINID--LPGTKVPSVISDNFEGGRLLTEAIIRHFPAE 186
           L +    +   + +   +     + +D  L G     V  D+ +G  L T  ++      
Sbjct: 119 LIVASVGEDRDLLDSLASVRTPMVIVDRALEGVAADLVRIDHEQGAYLATRHLL------ 172

Query: 187 RPLEPDDLYLFGGRDDHATRE-RIRGFRAVKSDLLGADPDECIWPTGYAADNARKAFEAF 245
             L   D+   GG    +  + R+ GF    ++       + +  + + +     A    
Sbjct: 173 -DLGHRDIACIGGPASTSVAQLRLAGFHRALAEAGVTPRQDWLLSSDFTSLGGYAAAALL 231

Query: 246 YEQHGKLPRGFFVNSSINFEGLLRFMAEHPLENFTDLVVGCYDYDPFASFLPFPVIMIRQ 305
            E  G+ P   F  + +   G+LR  AE  +   ++L V  +D    + ++ FP +    
Sbjct: 232 LE--GERPTAIFAGNDMIGIGVLRAAAERNICVPSELSVIGFDDIQISQYV-FPALT--- 285

Query: 306 NIEGMIAKAFEVIEEPRASLQIHMI-EPQLVPPRTALTGPLDALMDSEMPR 355
                + ++   + E  A L +  I EP    P   +  P   L +S  PR
Sbjct: 286 ----TVGQSIRELGENAAELLLRRIAEPLRGAPEQRIVAPSIVLRESTAPR 332