Pairwise Alignments

Query, 356 a.a., catabolite repressor protein from Sinorhizobium meliloti 1021

Subject, 334 a.a., catabolite repressor/activator from Escherichia coli ECRC98

 Score = 98.2 bits (243), Expect = 3e-25
 Identities = 79/328 (24%), Positives = 142/328 (43%), Gaps = 38/328 (11%)

Query: 13  DLSVLSGSSPSTVSAVLNGTWRKRRIKESTAELIRSLAETHQYTANRQARGLRSSRSGLV 72
           +++ L+G S +T S V+NG  ++ R+ + T E + ++   H Y  N  A GLR+ R+  +
Sbjct: 5   EIARLAGVSRTTASYVINGKAKQYRVSDKTVEKVMAVVREHNYHPNAVAAGLRAGRTRSI 64

Query: 73  GLLLPVHDNRYFSSLAQTFEAHVRSKGQCPIVVSASRDPEEERRTAETLISYSIDELFIC 132
           GL++P  +N  ++ +A   E   R +G   ++  +   P+ E R  E L+   +D + + 
Sbjct: 65  GLVIPDLENTSYTRIANYLERQARQRGYQLLIACSEDQPDNEMRCIEHLLQRQVDAIIVS 124

Query: 133 ------------GATDPDGVHEVCEAAGLRHINIDLPGTKVPSVISDNFEGGRLLTEAII 180
                        A DP  +  +  A    H           SV+  + +   +L E  +
Sbjct: 125 TSLPPEHPFYQRWANDPFPIVALDRALDREHFT---------SVVGADQDDAEMLAEE-L 174

Query: 181 RHFPAERPLEPDDLYLFGGRDDHATRERIRGFRAVKSDLLGADPDEC--IWPTGYAADNA 238
           R FPAE       LYL    +   +  R +GFR    D    DP E   ++   Y  + A
Sbjct: 175 RKFPAETV-----LYLGALPELSVSFLREQGFRTAWKD----DPREVHFLYANSYEREAA 225

Query: 239 RKAFEAFYEQHGKLPRGFFVNSSINFEGLLRFMAEHPLENFTDLVVGCYDYDPFASFLPF 298
            + FE + E H  +P+  F  S    +G++        +  +DL +  +  +    FL  
Sbjct: 226 AQLFEKWLETH-PMPQALFTTSFALLQGVMDVTLRRDGKLPSDLAIATFGDNELLDFLQC 284

Query: 299 PVIMIRQNIEGMIAKAFEVI----EEPR 322
           PV+ + Q    +  +  E++    +EPR
Sbjct: 285 PVLAVAQRHRDVAERVLEIVLASLDEPR 312