Pairwise Alignments

Query, 246 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 258 a.a., hexuronate regulon transcriptional repressor; autorepressor from Escherichia coli BL21

 Score =  116 bits (291), Expect = 4e-31
 Identities = 84/238 (35%), Positives = 123/238 (51%), Gaps = 19/238 (7%)

Query: 6   ESRRLYRQVADQMRALIERGELAHGSRLPAERELAQMFGVSRPTIREALIVLEVEGFIDI 65
           E RRLY+Q+A  ++  IE+G    G +LPAER +A    VSR  +REA+I+LEVEG++++
Sbjct: 5   EPRRLYQQLAADLKERIEQGVYLVGDKLPAERFIADEKNVSRTVVREAIIMLEVEGYVEV 64

Query: 66  RMGSGIYVTARPAPAADAPPEDFE----GPFELLRARAVVECAIAEEAARLARPEHISVL 121
           R GSGI+V +       A   + E    GPFELL+AR ++E  IAE AA     + I  L
Sbjct: 65  RKGSGIHVVSNQPRHQQAADTNMEFANYGPFELLQARQLIESNIAEFAATQVTKQDIMKL 124

Query: 122 --DDNLARMAAALEDRRLALAIDREFHVIVSSIIANQTLNRFVGSIHDMRM-TPYFEKLA 178
                 AR      D       D +FH+ V+    N  L   V  +   R   PY++KL 
Sbjct: 125 MAIQEQARGEQCFRDSEW----DLQFHIQVALATQNSALAAIVEKMWTQRSHNPYWKKLH 180

Query: 179 SYFEN--TETWRAAMEEHRVIRDAIALGDPAAARAAMRAHLDQSQLRLSASFGEEPSD 234
            + ++   + W    ++H  I  A+   DP AA+ AM  HL+ +++ L   F E   D
Sbjct: 181 EHIDSRTVDNW---CDDHDQILKALIRKDPHAAKLAMWQHLENTKIML---FNETSDD 232