Pairwise Alignments

Query, 283 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 306 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

 Score =  155 bits (392), Expect = 1e-42
 Identities = 91/291 (31%), Positives = 150/291 (51%), Gaps = 21/291 (7%)

Query: 1   MKHRTSPVLVEGPMPLMAPAVIFLALFFLVPLGYVIWMSLS------------------- 41
           +K R   +   G   ++    ++L LFF++P   V+ +S +                   
Sbjct: 6   LKRRLQRITPSGRHAVIGIPFLWLFLFFMLPFFIVLKISFAEADVAIPPYTEIYTFVEQK 65

Query: 42  -QPVIGLQNFGRLLNSSLFASVLYNTFKTALLVTLLSLLFAYPLAYAAANGSKRFATFLL 100
            Q V+ L N+  L +  L+ +    + K A   TLL LL  YP+AYA A+  K   T L+
Sbjct: 66  LQLVLNLGNYAMLGDDELYIAAYLGSLKMAFFSTLLCLLIGYPMAYAIASARKEMQTVLV 125

Query: 101 TVVALSFWTSYLVRTYAWMVILGNQGPVTALLSWFGWDPTP-KILFTTFSATLAMTHALI 159
            ++ +  WT+ L+R YAWM IL N G +   L   G    P +IL T  +  + + ++ +
Sbjct: 126 LLIMMPTWTAILIRVYAWMGILSNNGLLNGFLMSMGLINEPLQILNTNIAVYIGVVYSYL 185

Query: 160 PFMTMSLFAVMKRIDPLYVRAAENLGAHPFRAFVSVYLPLSAPGIVNGCTLVFITCLGFY 219
           PFM + L+A + + D   + AA +LG+  F +F  + +PLS  GI+ GC LVFI  +G +
Sbjct: 186 PFMILPLYANLVKHDQSLLEAASDLGSSTFNSFWKITVPLSKNGIIAGCMLVFIPVVGEF 245

Query: 220 VMPVLLGSPRDQMIAGIIGDQIEQTLDFGLGSAISIVLLALTLAVYGLYNR 270
           V+P LLG P   MI  ++  +     D+ + SA+++V+LA+ +    L+NR
Sbjct: 246 VIPELLGGPETLMIGKVLWQEFFNNRDWPVASALAVVMLAILIVPIILFNR 296