Pairwise Alignments

Query, 334 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 350 a.a., HTH-type transcriptional regulator GntR from Xanthobacter sp. DMC5

 Score =  107 bits (268), Expect = 3e-28
 Identities = 79/306 (25%), Positives = 143/306 (46%), Gaps = 7/306 (2%)

Query: 7   VSAQEVAERAGVSRSAVSRTFTPGASVSPETRRRVVEAAEALGYHVNHLARGLMRNESGI 66
           V+ ++VA  AGVS   VSR       V+ + + RV  A    GY  N +A  L    SGI
Sbjct: 12  VTMEDVARVAGVSAMTVSRVLRKPTLVNADLKARVEAAIRETGYIYNLVASSLASQRSGI 71

Query: 67  VCLIVSEMSTPYRANLIRAMTQQLQNAGKVAMLINTDRSDDSVDLALRQAIRYRADASII 126
           + LI+  +++    + ++ ++   +      ++  T+ S    +  +   +R R D  +I
Sbjct: 72  IALILPTVASSIFTDSVKGVSDVARTHAVQMIMAETNYSPAEEEKVIEALLRRRPDGFVI 131

Query: 127 LSGMPDRSITQLCLKNGQRLVLINRDDDQQGPL--RINLDDAEAAGRVVTAFVRAGCRRL 184
           +     R+   L  K+G  + ++   D    P+   + L + +A   +  A V  G RR+
Sbjct: 132 VGVSHTRATRALLEKSG--VPVVETWDSTPTPIDSLVGLSNFDAMKAMTEALVAQGFRRI 189

Query: 185 AFANSQAGTPSLMAREHGFVA--TARAMGLPVLVERHGPTNYESGRVLAQRLLTLGERPD 242
            F  +         R  G+ A      +G P+++     T+ ESGR++A+R+  L  RPD
Sbjct: 190 VFVGTATPDRRAQMRAKGYEAGIAEAGLGAPLILNAGDLTSMESGRIIAERIAALRPRPD 249

Query: 243 AVFCATDLLACGFMDAARHQFRVSIPDLLCVAGFDDIEQAAWSSYDLTTFAQPVDRIAQE 302
           AV C  D+LA G +  A  +  +++P  + VAGF  ++ ++  +  L+T   P   + Q+
Sbjct: 250 AVLCLNDVLAAGAL-LAFQRMGITVPADIAVAGFGGLDFSSHLNPSLSTVDIPRYEMGQK 308

Query: 303 AVAWLV 308
           A   L+
Sbjct: 309 AAEMLL 314