Pairwise Alignments

Query, 334 a.a., LacI family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 365 a.a., Ribose operon repressor from Variovorax sp. SCN45

 Score =  118 bits (296), Expect = 2e-31
 Identities = 106/335 (31%), Positives = 158/335 (47%), Gaps = 19/335 (5%)

Query: 10  QEVAERAGVSRSAVSRTFTPGASVSPETRRRVVEAAEALGYHVNHLARGLMRNESGIVCL 69
           ++VA +A VS + VS        VS + R RV  A   LGY  N +AR L  N +  + +
Sbjct: 5   KDVALQAEVSVTTVSHVVNDTRHVSAKVRERVELAIRELGYVPNAMARSLKSNTTSTLGM 64

Query: 70  IVSEMSTPYRANLIRAMTQQLQNAGKVAMLINTDRSDDSVDLALRQAIRYRADASIIL-- 127
           ++   S PY A ++R +  +   AG   +L NTD       + L+     R D  I++  
Sbjct: 65  LIPNSSNPYFAEIVRIVEDRCFGAGYTLVLCNTDDEPHRQSVYLQVLAERRIDGLIVVLT 124

Query: 128 -SGMPDRSITQLCLKNGQRLVLINRDDDQQGPLRINLDDAEAAGRV--VTAFVRAGCRRL 184
            +G  D  + QL   +G R+  +  D +   P    ++ A   G +  V   +  G +R+
Sbjct: 125 GTGDDDALVKQL---HGLRVPTVLVDREIADPACDLVETAHMQGGLLAVRHLLSLGHKRI 181

Query: 185 AFANSQAGT-PSLMAREHGFVATARAMGLP------VLVERHGPTNYESGRVLAQRLLTL 237
           A    QAG  PS    E   +A A A   P       L+ R G T+ + G      +L  
Sbjct: 182 ACIGGQAGVMPSEQRIEGWRMALAEAGATPDIANGDALLWRGGFTS-QGGYEAMHAILRT 240

Query: 238 GERPDAVFCATDLLACGFMDAARHQFRVSIPDLLCVAGFDDIEQAAWSSYDLTTFAQPVD 297
             +P AVF   DL+A G + AA H+  V +PD L + GFDDIE +A++S  LTT AQP +
Sbjct: 241 ERKPSAVFVCNDLMAIGALRAA-HESGVRVPDDLSIVGFDDIELSAYTSPPLTTVAQPKE 299

Query: 298 RIAQEAVAWLVNER--QEPVDHSVRFQPDLVWRSS 330
           RI   AV  L+ +   +      V  QP+L  R+S
Sbjct: 300 RIGAMAVDMLLEQMGGKRRDARKVVLQPELRVRAS 334